RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 GALNTL6Q49A17 601 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 SYT14P1Q58G82 188 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 SLC25A53Q5H9E4 307 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 PDZK1Q5T2W1 519 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ABLIM2Q6H8Q1 611 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 KLHL24Q6TFL4 600 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 CASP12Q6UXS9 341 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ZYG11AQ6WRX3 759 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 SYT10Q6XYQ8 523 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 TIFABQ6ZNK6 161 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 FRMD7Q6ZUT3 714 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 R3HCC1LQ7Z5L2 792 aaKnown RBP7.05□□□□□ -1.28
CHFR-211ENST00000535897 SPATA19Q7Z5L4 167 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 MTDHQ86UE4 582 aaKnown RBP7.05□□□□□ -1.28
CHFR-211ENST00000535897 RFLNBQ8N5W9 214 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 CCDC63Q8NA47 563 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 OR56A1Q8NGH5 318 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 PIGXQ8TBF5 258 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 TMEM234Q8WY98 164 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ST8SIA1Q92185 356 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 METTL2AQ96IZ6 378 aaKnown RBP7.05□□□□□ -1.28
CHFR-211ENST00000535897 SORCS2Q96PQ0 1159 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 KCNS3Q9BQ31 491 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ACTRT3Q9BYD9 372 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 PLA2G12AQ9BZM1 189 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 ADAM19Q9H013 955 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 UPB1Q9UBR1 384 aa7.05□□□□□ -1.28
CHFR-211ENST00000535897 SPIN1Q9Y657 262 aaPredicted RBP7.05□□□□□ -1.28
CHFR-211ENST00000535897 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 IGKV3D-15A0A087WSY6 115 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 SERINC4A6NH21 518 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF716A6NP11 495 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 VWC2LB2RUY7 222 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 CFLARO15519 480 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 WIPF1O43516 503 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 SPRY1O43609 319 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 TBX19O60806 448 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 CHEK2O96017 543 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 LINC00032P0C843 101 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 UBTFL6P0CB48 400 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 NEFHP12036 1026 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF23P17027 643 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ITGA2P17301 1181 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 CDH2P19022 906 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 PGCP20142 388 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 PRPH2P23942 346 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 SOAT1P35610 550 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 FRKP42685 505 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 FOXG1P55316 489 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 SESN3P58005 492 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 NAA20P61599 178 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 RFTN2Q52LD8 501 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 TMPPEQ6ZT21 453 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 MEX3DQ86XN8 651 aaKnown RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 DDIASQ8IXT1 998 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF540Q8NDQ6 660 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 OR52E4Q8NGH9 312 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 OR2T11Q8NH01 316 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 OR5AK3PQ8NH89 298 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF563Q8TA94 476 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 ACMSDQ8TDX5 336 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 ZNF524Q96C55 264 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 MTERF3Q96E29 417 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 C1orf159Q96HA4 380 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 MUS81Q96NY9 551 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 OCEL1Q9H607 264 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 TNFRSF12AQ9NP84 129 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 MYOZ1Q9NP98 299 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 SIRT3Q9NTG7 399 aaPredicted RBP7.04□□□□□ -1.28
CHFR-211ENST00000535897 MALT1Q9UDY8 824 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 TBK1Q9UHD2 729 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 DCDC2Q9UHG0 476 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 MOKQ9UQ07 419 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 AMDHD2Q9Y303 409 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 CCL27Q9Y4X3 112 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 KCNE3Q9Y6H6 103 aa7.04□□□□□ -1.28
CHFR-211ENST00000535897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHFR-211ENST00000535897 LRP5LA4QPB2 252 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 TMEM114B3SHH9 223 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 NPIPB8E9PQR5 432 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 G3V2L1 256 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 KLF11O14901 512 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 AZIN1O14977 448 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 SCAMP2O15127 329 aaKnown RBP7.03□□□□□ -1.28
CHFR-211ENST00000535897 GLRA3O75311 464 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 SKAP2O75563 359 aaPredicted RBP7.03□□□□□ -1.28
CHFR-211ENST00000535897 SNUPNO95149 360 aaKnown RBP7.03□□□□□ -1.28
CHFR-211ENST00000535897 WNT11O96014 354 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 CSTAP01040 98 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 ITGA5P08648 1049 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 LAMP1P11279 417 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 CCNA2P20248 432 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 APEX1P27695 318 aaKnown RBP7.03□□□□□ -1.28
CHFR-211ENST00000535897 CFPP27918 469 aa7.03□□□□□ -1.28
CHFR-211ENST00000535897 GCAP28676 217 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms