RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MTDHQ86UE4 582 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MISPQ8IVT2 679 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 RIBC1Q8N443 379 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 KIR3DL3Q8N743 410 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 CEP70Q8NHQ1 597 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 GPR119Q8TDV5 335 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 CKAP2Q8WWK9 683 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 YIPF5Q969M3 257 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 SLC25A28Q96A46 364 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ELP4Q96EB1 424 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MS4A14Q96JA4 679 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 BAG1Q99933 345 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 CITED1Q99966 193 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 TRIM5Q9C035 493 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ELOVL6Q9H5J4 265 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF442Q9H7R0 627 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ZMAT3Q9HA38 289 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 C3orf14Q9HBI5 128 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 EQTNQ9NQ60 294 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 UBQLN4Q9NRR5 601 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF275Q9NSD4 429 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 NSMCE4AQ9NXX6 385 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF69Q9UC07 566 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MID2Q9UJV3 735 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 SYCE1LA8MT33 242 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CLDN34H7C241 214 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 SCDO00767 359 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-206ENST00000535290 KCNK2O95069 426 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 NKX2-2O95096 273 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 TSPAN15O95858 294 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CECR9P0C854 216 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 HPGDP15428 266 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CHN1P15882 459 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 ACHEP22303 614 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 IVDP26440 423 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CCNG1P51959 295 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 TGFBR3Q03167 851 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 MSMPQ1L6U9 139 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 NDUFAF6Q330K2 333 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 BEAN1Q3B7T3 259 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CCNJQ5T5M9 372 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 GALNT18Q6P9A2 607 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 KLHL24Q6TFL4 600 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 TMPPEQ6ZT21 453 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 SPATC1Q76KD6 591 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CCDC103Q8IW40 242 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 FBXO36Q8NEA4 188 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 NUP37Q8NFH4 326 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 OR4F15Q8NGB8 312 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 FBXO30Q8TB52 745 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 PHOSPHO1Q8TCT1 267 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 C16orf78Q8WTQ4 265 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 SELENOMQ8WWX9 145 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 RDH5Q92781 318 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 HOXB13Q92826 284 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-206ENST00000535290 LRRC39Q96DD0 335 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 DNAJA3Q96EY1 480 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
CLIP1-206ENST00000535290 RBBP8Q99708 897 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 QRSL1Q9H0R6 528 aaKnown RBP7.11□□□□□ -1.27
CLIP1-206ENST00000535290 GLIPR2Q9H4G4 154 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF665Q9H7R5 613 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 UPB1Q9UBR1 384 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 CARD8Q9Y2G2 431 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 ACTL7BQ9Y614 415 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
CLIP1-206ENST00000535290 ARHGAP32A7KAX9 2087 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 GNG14A0A1W2PPG7 69 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 A0A1W2PQD3 144 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 G3V4G9 280 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 SULT2B1O00204 365 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 NR5A2O00482 541 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 PPP6CO00743 305 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 GPR171O14626 319 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TIMM23O14925 209 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 PCDH7O60245 1069 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 RP2O75695 350 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CELA3BP08861 270 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 MPGP29372 298 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 P2RX1P51575 399 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 SLC16A1P53985 500 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TUBA1BP68363 451 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TUBA4AP68366 448 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 HEPACAMQ14CZ8 416 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 PPP1R7Q15435 360 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TIGD2Q4W5G0 525 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 SLC9B1Q4ZJI4 515 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 SLC25A53Q5H9E4 307 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 C1QTNF12Q5T7M4 302 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CASP12Q6UXS9 341 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 RAPH1Q70E73 1250 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TUBA1AQ71U36 451 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 MYPOPQ86VE0 399 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 LSRQ86X29 649 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CENPLQ8N0S6 344 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 MMGT1Q8N4V1 131 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 OR4F6Q8NGB9 312 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 RHEBL1Q8TAI7 183 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 FAM110DQ8TAY7 271 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms