RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PCNX1Q96RV3 2341 aa10.78□□□□□ -0.68
SSBP3-214ENST00000533209 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.68
SSBP3-214ENST00000533209 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 NCOA6Q14686 2063 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 A0A0G2JNJ9 132 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ELOVL7A1L3X0 281 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 TNFSF11O14788 317 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 TGM6O95932 706 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 UQCRBP14927 111 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 CD247P20963 164 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 TIMP3P35625 211 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 APOBEC1P41238 236 aaKnown RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 KCNJ5P48544 419 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 GSK3BP49841 420 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 RPS3AP61247 264 aaKnown RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 TMEM176BQ3YBM2 270 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 C3orf33Q6P1S2 294 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 POMZP3Q6PJE2 187 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ESPNLQ6ZVH7 1005 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 GRINAQ7Z429 371 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 LSRQ86X29 649 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ADGRG3Q86Y34 549 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 C9orf106Q8NAJ2 232 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 NAXEQ8NCW5 288 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ATP6V1C2Q8NEY4 427 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 BHLHE22Q8NFJ8 381 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 OR10Q1Q8NGQ4 319 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 OR10D3Q8NH80 312 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 OR2V1Q8NHB1 315 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 FIG4Q92562 907 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 WNT2BQ93097 391 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 SDCCAG3Q96C92 435 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF845Q96IR2 970 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-214ENST00000533209 PSMG3-AS1Q96PY0 264 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 ADAM19Q9H013 955 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 COQ10BQ9H8M1 238 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 TMEM181Q9P2C4 612 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 Q9UFV3 132 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 OSGIN1Q9UJX0 560 aa10.77□□□□□ -0.69
SSBP3-214ENST00000533209 DOPEY2Q9Y3R5 2298 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 TMED7-TICAM2A0A0A6YYA0 188 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 TMEM229AB2RXF0 380 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 SYT5O00445 386 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 CXCL13O43927 109 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 LGI1O95970 557 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 IL2RAP01589 272 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 C8BP07358 591 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 T-ENOLP0DO92 83 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 TACR3P29371 465 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 HTR3AP46098 478 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 EIF1AXP47813 144 aaKnown RBP10.76□□□□□ -0.69
SSBP3-214ENST00000533209 POLR2HP52434 150 aaKnown RBP10.76□□□□□ -0.69
SSBP3-214ENST00000533209 COPZ1P61923 177 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 SLC25A3Q00325 362 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 PON3Q15166 354 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 NRF1Q16656 503 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 PDSS1Q5T2R2 415 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 HBMQ6B0K9 141 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 WBP2NLQ6ICG8 309 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 CHMP1BQ7LBR1 199 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 PGAM4Q8N0Y7 254 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 CADM2Q8N3J6 435 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 ASB5Q8WWX0 329 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 OSTF1Q92882 214 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 NSL1Q96IY1 281 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 TM9SF2Q99805 663 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 ARHGDIGQ99819 225 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 ALG2Q9H553 416 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 SERINC1Q9NRX5 453 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 COQ3Q9NZJ6 369 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 CHRNA9Q9UGM1 479 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 TMED7Q9Y3B3 224 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 HECTD1Q9ULT8 2610 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 SPTBN1Q01082 2364 aaKnown RBP10.76□□□□□ -0.69
SSBP3-214ENST00000533209 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
SSBP3-214ENST00000533209 A0A1W2PNR3 127 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 TMEM72A0PK05 275 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SLC22A20A6NK97 555 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 GJE1A6NN92 205 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 HSPB2A8KAH6 182 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 M0R3H8 397 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 TPST2O60704 377 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 CLDN1O95832 211 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 FESP07332 822 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 HTR2AP28223 471 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 CHRNB4P30926 498 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 KDELR2P33947 212 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 CPOXP36551 454 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 MNAT1P51948 309 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 CARD18P57730 90 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 RGS8P57771 180 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-214ENST00000533209 HSPB2Q16082 182 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SGCBQ16585 318 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SYT14P1Q58G82 188 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 LIX1LQ8IVB5 337 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 LSMEM1Q8N8F7 131 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 OR4D11Q8NGI4 311 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 FNDC9Q8TBE3 224 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms