RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR8J1Q8NGP2 316 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF596Q8TC21 504 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ELMO1Q92556 727 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RAD54LQ92698 747 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MYDGFQ969H8 173 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 OTUB1Q96FW1 271 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 OLFM3Q96PB7 478 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TAAR1Q96RJ0 339 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TSC22D3Q99576 134 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NDNQ99608 321 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ANGPTL4Q9BY76 406 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 IL22Q9GZX6 179 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 GBA3Q9H227 469 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 GAL3ST2Q9H3Q3 398 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 LRRN3Q9H3W5 708 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CAB39LQ9H9S4 337 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RNPEPL1Q9HAU8 725 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CDH20Q9HBT6 801 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 VAT1LQ9HCJ6 419 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MRPL47Q9HD33 250 aaKnown RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF275Q9NSD4 429 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 SAMSN1Q9NSI8 373 aaKnown RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CUTCQ9NTM9 273 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZCCHC3Q9NUD5 404 aaKnown RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MED17Q9NVC6 651 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF446Q9NWS9 450 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PDP1Q9P0J1 537 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 POLLQ9UGP5 575 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 UBQLN2Q9UHD9 624 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 DCDC2Q9UHG0 476 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CLEC2DQ9UHP7 191 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NARFQ9UHQ1 456 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NAGKQ9UJ70 344 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RNF24Q9Y225 148 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 GINS2Q9Y248 185 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF175Q9Y473 711 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 INSRP06213 1382 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MTUS2Q5JR59 1369 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CCNB3Q8WWL7 1395 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TRIOBPQ9H2D6 2365 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CNTLNQ9NXG0 1405 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TRAV25A0A0B4J276 109 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TRGV8A0A0C4DH27 118 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 BCLAF3A2AJT9 711 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RAB19A4D1S5 217 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 YDJCA8MPS7 323 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 C2CD4DB7Z1M9 353 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 H3BMM5 538 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 K7EQG2 157 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 AP5Z1O43299 807 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 COCHO43405 550 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 NOS1APO75052 506 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SNNO75324 88 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 STX11O75558 287 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RPS6KA5O75582 802 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RAD51DO75771 328 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 NOL4O94818 638 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SLC16A8O95907 504 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 F10P00742 488 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 IFNA6P05013 189 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SERPINA5P05154 406 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 FCER2P06734 321 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 STSP08842 583 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ALPIP09923 528 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR4E1P0C645 316 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 IQCF3P0C7M6 154 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 STAG3L1P0CL83 205 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GFAPP14136 432 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CPA3P15088 417 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF18P17022 549 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ELK1P19419 428 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CYP3A5P20815 502 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PSMB6P28072 239 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 HTR2AP28223 471 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 LCN1P31025 176 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GTF2H1P32780 548 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 HSD17B3P37058 310 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CD79BP40259 229 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SLC1A2P43004 574 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RGRP47804 291 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 KCNJ1P48048 391 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CSNK1DP48730 415 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RGS4P49798 205 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RAB9AP51151 201 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 AP1S2P56377 157 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CLDN15P56746 228 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 NLRP11P59045 1033 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 DAOAP59103 153 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ARF6P62330 175 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CYP24A1Q07973 514 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PPP1R8Q12972 351 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 NPTX1Q15818 432 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 VAMP3Q15836 100 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 KYAT1Q16773 422 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TATDN3Q17R31 274 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZCWPW2Q504Y3 356 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 BEX5Q5H9J7 111 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 COQ5Q5HYK3 327 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 NHLRC3Q5JS37 347 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms