RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 VWC2LB2RUY7 222 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 NDUFS8O00217 210 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 EIF4E2O60573 245 aaKnown RBP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 KRT33AO76009 404 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 LINC00032P0C843 101 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 UROSP10746 265 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF23P17027 643 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 RYKP34925 604 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 SUMO3P55854 103 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 PRPS1P60891 318 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 RPL38P63173 70 aaKnown RBP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 KIAA0040Q15053 153 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 PDZK1Q5T2W1 519 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 BHLHB9Q6PI77 547 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 CASP12Q6UXS9 341 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 SYT10Q6XYQ8 523 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 RINLQ6ZS11 566 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 OLIG3Q7RTU3 272 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 C3orf56Q8N813 242 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 WDR31Q8NA23 367 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 ZNF540Q8NDQ6 660 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 HOXB13Q92826 284 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 STACQ99469 402 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 SOX7Q9BT81 388 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 ACTRT3Q9BYD9 372 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 BPESC1Q9GZL8 116 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 ACSS1Q9NUB1 689 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-206ENST00000531430 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 PYCARDQ9ULZ3 195 aa8.09□□□□□ -1.11
NEDD8-206ENST00000531430 NUP214P35658 2090 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 GOLGA8QA0A0J9YX86 632 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 GOLGA8OA6NCC3 632 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SERINC4A6NH21 518 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 GOLGA8NF8WBI6 632 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 GPR171O14626 319 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 WNT11O96014 354 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 CSTAP01040 98 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 IFI6P09912 130 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 UBTFL6P0CB48 400 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 DDX5P17844 614 aaKnown RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SDC1P18827 310 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 PGCP20142 388 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 APEX1P27695 318 aaKnown RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 NTF4P34130 210 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SOAT1P35610 550 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SERPINF1P36955 418 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 MAGEA8P43361 318 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 ACTG1P63261 375 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 TGFBR3Q03167 851 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 MST1LQ2TV78 715 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 RFTN2Q52LD8 501 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SYT14P1Q58G82 188 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 DDIASQ8IXT1 998 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 OR7A2PQ8NGA2 310 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 OR5D16Q8NGK9 328 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 OR5AK3PQ8NH89 298 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 TMEM234Q8WY98 164 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 GCDHQ92947 438 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 CCDC126Q96EE4 140 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 OR7D2Q96RA2 312 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SNX18Q96RF0 628 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 FMO2Q99518 471 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 BHLHE41Q9C0J9 482 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 LAT2Q9GZY6 243 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 RAB1BQ9H0U4 201 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 TSPYL1Q9H0U9 437 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 METTL17Q9H7H0 456 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 TNFRSF12AQ9NP84 129 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SLC17A5Q9NRA2 495 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 CTPS2Q9NRF8 586 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 DUSP22Q9NRW4 184 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 PARPBPQ9NWS1 579 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 MKLN1Q9UL63 735 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 AMDHD2Q9Y303 409 aa8.08□□□□□ -1.12
NEDD8-206ENST00000531430 SPIN1Q9Y657 262 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
NEDD8-206ENST00000531430 DYSFO75923 2080 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 VSTM5A8MXK1 200 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 AZIN1O14977 448 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 KCNAB3O43448 404 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 SNUPNO95149 360 aaKnown RBP8.07□□□□□ -1.12
NEDD8-206ENST00000531430 VENTXO95231 258 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 STAMBPO95630 424 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 C6orf47O95873 294 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 CHEK2O96017 543 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 ITGA5P08648 1049 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 KRT16P08779 473 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 OR4A8P0C604 315 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 LAMP1P11279 417 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 DAOP14920 347 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 CREB1P16220 341 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 MATN1P21941 496 aa8.07□□□□□ -1.12
NEDD8-206ENST00000531430 IL2RGP31785 369 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms