RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TMEM41BQ5BJD5 291 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 PAGE3Q5JUK9 113 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 NCR3LG1Q68D85 454 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 ZNF573Q86YE8 665 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 MKXQ8IYA7 352 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 MYOCDQ8IZQ8 938 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 CENPLQ8N0S6 344 aaPredicted RBP2.98□□□□□ -1.93
CTR9-204ENST00000529355 MYLPFQ96A32 169 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 TMEM101Q96IK0 257 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 ZNF416Q9BWM5 594 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 PALMDQ9NP74 551 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 RRAGDQ9NQL2 400 aaPredicted RBP2.98□□□□□ -1.93
CTR9-204ENST00000529355 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
CTR9-204ENST00000529355 GNG12Q9UBI6 72 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 TMCC3Q9ULS5 477 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 AURKCQ9UQB9 309 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 ERVW-1Q9UQF0 538 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 U3KQV3 271 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 SMARCA2P51531 1590 aa2.98□□□□□ -1.93
CTR9-204ENST00000529355 PEG3Q9GZU2 1588 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 IGKV1D-8A0A087WSZ0 117 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 IGHV2-70DA0A0C4DH43 119 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 CLDN5O00501 218 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 HCN1O60741 890 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 NPIPB7O75200 414 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 B3GALNT1O75752 331 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 NR2C1P13056 603 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 GCFC2P16383 781 aaKnown RBP2.97□□□□□ -1.93
CTR9-204ENST00000529355 PGCP20142 388 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 CA8P35219 290 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 MDH1P40925 334 aaKnown RBP2.97□□□□□ -1.93
CTR9-204ENST00000529355 RPS10P46783 165 aaKnown RBP2.97□□□□□ -1.93
CTR9-204ENST00000529355 ACADVLP49748 655 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 CSNK1G2P78368 415 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 UNC119Q13432 240 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 CCDC57Q2TAC2 916 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 PYHIN1Q6K0P9 492 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 KCNIP4Q6PIL6 250 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 C16orf62Q7Z3J2 963 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 SLC38A6Q8IZM9 456 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 ARL6IP6Q8N6S5 226 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 C15orf54Q8N8G6 183 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 FADS6Q8N9I5 356 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 SUMF2Q8NBJ7 301 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 GIMAP1Q8WWP7 306 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 SLC5A11Q8WWX8 675 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 CHCHD10Q8WYQ3 142 aaPredicted RBP2.97□□□□□ -1.93
CTR9-204ENST00000529355 OR1E3Q8WZA6 343 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 MYDGFQ969H8 173 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 EBF4Q9BQW3 602 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 DPH5Q9H2P9 285 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 RHBGQ9H310 441 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 NARFLQ9H6Q4 476 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 ZNHIT6Q9NWK9 470 aaKnown RBP2.97□□□□□ -1.93
CTR9-204ENST00000529355 ALG6Q9Y672 507 aa2.97□□□□□ -1.93
CTR9-204ENST00000529355 SF3B1O75533 1304 aaKnown RBP eCLIP2.96□□□□□ -1.93
CTR9-204ENST00000529355 A0A0G2JLM5 398 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 TMEM110-MUSTN1A8MSY1 372 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 FAM25EA8MYX2 175 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 RTL8CO15255 209 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 MSH4O15457 936 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 PRKYO43930 277 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 IGHDP01880 384 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 ASNSP08243 561 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 HOXC4P09017 264 aaPredicted RBP2.96□□□□□ -1.94
CTR9-204ENST00000529355 ALOX5P09917 674 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 DRD5P21918 477 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 PRKXP51817 358 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 UCNP55089 124 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 NUP107P57740 925 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 MECOMQ03112 1051 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 SLC10A7Q0GE19 358 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 TP53I3Q53FA7 332 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 RABGAP1LQ5R372 815 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 GPRC6AQ5T6X5 926 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 AP1ARQ63HQ0 302 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 ACOT7LQ6ZUV0 252 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 ACOT1Q86TX2 421 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 NRMQ8IXM6 262 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 FAM3CQ92520 227 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 GAL3ST1Q99999 423 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 THUMPD2Q9BTF0 503 aaKnown RBP2.96□□□□□ -1.94
CTR9-204ENST00000529355 SPATA16Q9BXB7 569 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 TMEM117Q9H0C3 514 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 NXF5Q9H1B4 397 aaKnown RBP2.96□□□□□ -1.94
CTR9-204ENST00000529355 NANOGQ9H9S0 305 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 QPCTLQ9NXS2 382 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 HOXC10Q9NYD6 342 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 C6orf203Q9P0P8 240 aaPredicted RBP2.96□□□□□ -1.94
CTR9-204ENST00000529355 PCSK1NQ9UHG2 260 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 RABL2BQ9UNT1 228 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 ATP6V0A2Q9Y487 856 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 PIK3R4Q99570 1358 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 NACAE9PAV3 2078 aa2.96□□□□□ -1.94
CTR9-204ENST00000529355 IGKV6D-21A0A0A0MT36 114 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 CLDN3O15551 220 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ZNF780AO75290 641 aaPredicted RBP2.95□□□□□ -1.94
CTR9-204ENST00000529355 ERLIN1O75477 346 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 PSG2P11465 335 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 RNH1P13489 461 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms