RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ARMC1Q9NVT9 282 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 RLIMQ9NVW2 624 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 FLRT3Q9NZU0 649 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 DNAJB9Q9UBS3 223 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 FBXL2Q9UKC9 423 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 ACAD8Q9UKU7 415 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 MCTS1Q9ULC4 181 aaKnown RBP7.19□□□□□ -1.26
SSBP3-211ENST00000528787 NPIPA1Q9UND3 350 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 VDAC3Q9Y277 283 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 TRAPPC4Q9Y296 219 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 CORINQ9Y5Q5 1042 aa7.19□□□□□ -1.26
SSBP3-211ENST00000528787 CFAP47Q6ZTR5 3102 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 FREM3P0C091 2139 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TRAV36DV7A0A075B6V5 113 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 A0A087WUJ7 227 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TMED7-TICAM2A0A0A6YYA0 188 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 A0A0B4J2E0 115 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 A0A1B0GX12 115 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 B8ZZF3 427 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 G3V3Y1 287 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 H0Y3Z8 333 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SEC14L5O43304 696 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 AKAP8O43823 692 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ZIC3O60481 467 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TPST1O60507 370 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 E2F6O75461 281 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GCM2O75603 506 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 VAMP5O95183 116 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GADD45GO95257 159 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 AHSA1O95433 338 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SYNGR4O95473 234 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 PMS2P2O95744 297 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 CST1P01037 141 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 LDLRP01130 860 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 C1QCP02747 245 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GKN3PP0CG01 181 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TFPIP10646 304 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TACR3P29371 465 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ACAA2P42765 397 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 MAGEA2P43356 314 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 CD97P48960 835 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SLC35A1P78382 337 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 C19orf57Q0VDD7 668 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SGCBQ16585 318 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GLIPR1L2Q4G1C9 344 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SYT14P1Q58G82 188 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 DCST1Q5T197 706 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TMEM211Q6ICI0 200 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 OR2A2Q6IF42 318 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 RPL13AP3Q6NVV1 102 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GFRALQ6UXV0 394 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 HDDC2Q7Z4H3 204 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 LILRA2Q8N149 483 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 CISD2Q8N5K1 135 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 PAPD5Q8NDF8 572 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GPR32P1Q8NGA4 272 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 OR6T1Q8NGN1 323 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ZPLD1Q8TCW7 415 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ACOT11Q8WXI4 607 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SNRNP40Q96DI7 357 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SLC41A3Q96GZ6 507 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ZFP3Q96NJ6 502 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 BARD1Q99728 777 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TM9SF2Q99805 663 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 SLX1AQ9BQ83 275 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ASPNQ9BXN1 380 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 HES7Q9BYE0 225 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 VCXQ9H320 206 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TP63Q9H3D4 680 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF556Q9HAH1 456 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 GP6Q9HCN6 339 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 RIMS3Q9UJD0 308 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 TMED7Q9Y3B3 224 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 MED31Q9Y3C7 131 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF175Q9Y473 711 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 AP4S1Q9Y587 144 aa7.18□□□□□ -1.26
SSBP3-211ENST00000528787 DSPP15924 2871 aaKnown RBP7.18□□□□□ -1.26
SSBP3-211ENST00000528787 DNAJC13O75165 2243 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 MGAQ8IWI9 3026 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ZFHX4Q86UP3 3567 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CENPVL1A0A0U1RR11 272 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 A0A1B0GUH1 482 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 A0A1B0GWA3 101 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 TCRBV5S2A0A599 114 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OR2M5A3KFT3 312 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 C2orf72A6NCS6 295 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ARRDC5A6NEK1 342 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CPSF4LA6NMK7 179 aaKnown RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 H3BML4 177 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 M0R3H8 397 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OR6A2O95222 327 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 NTN1O95631 604 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 NR2C1P13056 603 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF708P17019 499 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 GSTM3P21266 225 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ATP6V1B2P21281 511 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 IDUAP35475 653 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 MSX2P35548 267 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OR1E2P47887 323 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms