RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 HMX3A6NHT5 357 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 ZNF736B4DX44 427 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 OR7A17O14581 309 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 FRS3O43559 492 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 KNG1P01042 644 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 TAS2R46P59540 309 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 SPRED3Q2MJR0 410 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 CGB2Q6NT52 195 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 S100A7AQ86SG5 101 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 PPP1R3BQ86XI6 285 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 OR14K1Q8NGZ2 314 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 UHRF1Q96T88 793 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 SLC6A20Q9NP91 592 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 TIMM8BQ9Y5J9 83 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 CEPT1Q9Y6K0 416 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 BTAF1O14981 1849 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 GPRIN2O60269 458 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 SUSD5O60279 629 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 FOXD2O60548 495 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 RAD1O60671 282 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 HTR2BP41595 481 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 TAS2R19P59542 299 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 TGFBR3Q03167 851 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 RBM39Q14498 530 aaKnown RBP7.94□□□□□ -1.14
CTNND1-219ENST00000528621 DUSP7Q16829 419 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 NKPD1Q17RQ9 610 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 SHISA6Q6ZSJ9 500 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 CYB561A3Q8NBI2 242 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 FBXO27Q8NI29 283 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 ARL11Q969Q4 196 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 C3orf30Q96M34 536 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 SLC25A31Q9H0C2 315 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 KIR3DX1Q9H7L2 352 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 B3GNT2Q9NY97 397 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 HHLA2Q9UM44 414 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 ZNF281Q9Y2X9 895 aa7.94□□□□□ -1.14
CTNND1-219ENST00000528621 NSG1A0A0A6YYJ2 146 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 FAM155AB1AL88 458 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 B4DXG7 233 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 SHOXO15266 292 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 RFPL3O75679 317 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 TFP02787 698 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 OR8U9P0C7N5 309 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 HLA-FP30511 346 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 CA5AP35218 305 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 EFNA3P52797 238 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 RBPJQ06330 500 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 MBOAT2Q6ZWT7 520 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 MEX3DQ86XN8 651 aaKnown RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 GTPBP8Q8N3Z3 284 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 OR1J2Q8NGS2 313 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 SLC2A12Q8TD20 617 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 GTF2H4Q92759 462 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 ISL2Q96A47 359 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 BORCS7Q96B45 105 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 BABAM2Q9NXR7 383 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 IGLV3-10A0A075B6K4 115 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 OTOL1A6NHN0 477 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 J3KTA2 159 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 AQP9O43315 295 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 GJA4P35212 333 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 EIF2DP41214 584 aaKnown RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 KIAA1024LP59773 190 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 RPL23AP62750 156 aaKnown RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 COL9A2Q14055 689 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 MPEG1Q2M385 716 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 C3orf38Q5JPI3 329 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 DEDD2Q8WXF8 326 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 GGHQ92820 318 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 MSI2Q96DH6 328 aaKnown RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 SGCZQ96LD1 299 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 GLTPQ9NZD2 209 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 NHSQ6T4R5 1651 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 COL22A1Q8NFW1 1626 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 PHIPQ8WWQ0 1821 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 TMEM212A6NML5 194 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 SULT1C2O00338 296 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 IFNA4P05014 189 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 CD46P15529 392 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 PRKACBP22694 351 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 RGRP47804 291 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 BLOC1S1P78537 153 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 DCAF12Q5T6F0 453 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 YOD1Q5VVQ6 348 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 MTFR2Q6P444 385 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 EID2Q8N6I1 236 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 ELP4Q96EB1 424 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 AP1S3Q96PC3 154 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 RTP3Q9BQQ7 232 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 SCN7AQ01118 1682 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 NUDT21O43809 227 aaKnown RBP7.93□□□□□ -1.14
CTNND1-219ENST00000528621 HPGDSO60760 199 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 CAPNS1P04632 268 aa7.93□□□□□ -1.14
CTNND1-219ENST00000528621 CHATP28329 748 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms