RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PPM1BO75688 479 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 NDUFB2O95178 105 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 CD27P26842 260 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 MLLT3P42568 568 aaPredicted RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 RPS5P46782 204 aaKnown RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 EVX1P49640 407 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 CAV3P56539 151 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 C16orf52Q8NHV5 167 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SLC38A3Q99624 504 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 CHRNA9Q9UGM1 479 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 A0A087WUJ7 227 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SHISA3A0PJX4 238 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SMIM30A4D0T7 59 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 TLCD2A6NGC4 264 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SERINC4A6NH21 518 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 REM1O75628 298 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 CDC123O75794 336 aaPredicted RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 IL9P15248 144 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 CD38P28907 300 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 HTR3AP46098 478 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SLC16A1P53985 500 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 BTG2P78543 158 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 MAT1AQ00266 395 aaKnown RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 CNIH2Q6PI25 160 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 KIRREL2Q6UWL6 708 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 C17orf82Q86X59 251 aaPredicted RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 CADM2Q8N3J6 435 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 BCORP1Q8N888 145 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 ZNF615Q8N8J6 731 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SMPDL3BQ92485 455 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 SGTBQ96EQ0 304 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 MMABQ96EY8 250 aaPredicted RBP14.12□□□□□ -0.15
USH1C-207ENST00000527720 TBX5Q99593 518 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 PPP1R3EQ9H7J1 279 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 ITGB1BP2Q9UKP3 347 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 ERVK-19Q9WJR5 959 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 OR10H1Q9Y4A9 318 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 NOX1Q9Y5S8 564 aa14.12□□□□□ -0.15
USH1C-207ENST00000527720 A0A1W2PR77 199 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 FITM1A5D6W6 292 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 CSTAP01040 98 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 CARTPTQ16568 116 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 PRR23CQ6ZRP0 262 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 VASH1Q7L8A9 365 aaPredicted RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 TPRA1Q86W33 373 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 OR7G1Q8NGA0 311 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 KCTD12Q96CX2 325 aaKnown RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 NEDD4LQ96PU5 975 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 DEPDC7Q96QD5 511 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 SLC19A3Q9BZV2 496 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 RAB33BQ9H082 229 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 RNF32Q9H0A6 362 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 PCED1AQ9H1Q7 454 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 MOV10Q9HCE1 1003 aaKnown RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 PDE7BQ9NP56 450 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 PCDHGB7Q9Y5F8 929 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 KNL1Q8NG31 2342 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 CEP192Q8TEP8 1941 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 COL5A1P20908 1838 aaPredicted RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 C2orf92A0A1B0GVN3 265 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 HPGDSO60760 199 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 IGF2P01344 180 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 WNT1P04628 370 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 ZNF85Q03923 595 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.11□□□□□ -0.15
USH1C-207ENST00000527720 LCN1P1Q5VSP4 162 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 SDR16C5Q8N3Y7 309 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 FAM160A2Q8N612 972 aaPredicted RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 POMGNT2Q8NAT1 580 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 OR51Q1Q8NH59 317 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 LMX1AQ8TE12 382 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 RLN3Q8WXF3 142 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 ERMAPQ96PL5 475 aaPredicted RBP14.11□□□□□ -0.15
USH1C-207ENST00000527720 HOXD1Q9GZZ0 328 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 ERVMER34-1Q9H9K5 563 aa14.11□□□□□ -0.15
USH1C-207ENST00000527720 PCDH15Q96QU1 1955 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 METTL12A8MUP2 240 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 CCNKO75909 580 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 TRAPPC2P0DI81 140 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 TRAPPC2BP0DI82 140 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 MAOAP21397 527 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ADH7P40394 386 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 FNTBP49356 437 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ERV3-1Q14264 604 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 GGTLC2Q14390 218 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 INSL4Q14641 139 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 TAB1Q15750 504 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ISXQ2M1V0 245 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 HBMQ6B0K9 141 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 FCRLBQ6BAA4 426 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 MED25Q71SY5 747 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 TDHQ8IZJ6 230 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 RDH10Q8IZV5 341 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ZNF687Q8N1G0 1237 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 OR5M3Q8NGP4 307 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 ART5Q96L15 291 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 LRIT1Q9P2V4 623 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms