RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CPNE5Q9HCH3 593 aa18.7■□□□□ 0.58
SMCO4-203ENST00000526869 ASCL3Q9NQ33 180 aa18.7■□□□□ 0.58
SMCO4-203ENST00000526869 C20orf141Q9NUB4 165 aa18.7■□□□□ 0.58
SMCO4-203ENST00000526869 TPRKBQ9Y3C4 175 aa18.7■□□□□ 0.58
SMCO4-203ENST00000526869 HEATR5AQ86XA9 2040 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 SH3D21A4FU49 640 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 CDC42EP2O14613 210 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 RCBTB2O95199 551 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 ITPKBP27987 946 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 RPL5P46777 297 aaKnown RBP18.69■□□□□ 0.58
SMCO4-203ENST00000526869 SLC9A3P48764 834 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 NR1H2P55055 460 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 TMEM201Q5SNT2 666 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 MEX3DQ86XN8 651 aaKnown RBP18.69■□□□□ 0.58
SMCO4-203ENST00000526869 P3H2Q8IVL5 708 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 OR10G3Q8NGC4 313 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 OR8D4Q8NGM9 314 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 OR8J1Q8NGP2 316 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 ST8SIA1Q92185 356 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 SGTBQ96EQ0 304 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 TEX12Q9BXU0 123 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 PLA2G12AQ9BZM1 189 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 CDCP1Q9H5V8 836 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 METTL7AQ9H8H3 244 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 RASSF1Q9NS23 344 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 TBC1D23Q9NUY8 699 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 KLRF1Q9NZS2 232 aa18.69■□□□□ 0.58
SMCO4-203ENST00000526869 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 IGKV1D-42A0A075B6H8 117 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 ENO4A6NNW6 628 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 KPNA4O00629 521 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 HCN1O60741 890 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 TFAP2AP05549 437 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 FMO3P31513 532 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 PTGDSP41222 190 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 HTR3AP46098 478 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 CRYZQ08257 329 aaKnown RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 Q0VFX4 171 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 QPRTQ15274 297 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 COL28A1Q2UY09 1125 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 SLC25A30Q5SVS4 291 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 SLC30A6Q6NXT4 461 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 PTCHD4Q6ZW05 846 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 GPALPP1Q8IXQ4 340 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 IL22RA1Q8N6P7 574 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 BPIFB6Q8NFQ5 453 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 FANK1Q8TC84 345 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 IPCEF1Q8WWN9 437 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 LIPHQ8WWY8 451 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 TMEM234Q8WY98 164 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 UBE2FQ969M7 185 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 KIAA1143Q96AT1 154 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 FRMD6Q96NE9 622 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 DUSP21Q9H596 190 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 CCNB1IP1Q9NPC3 277 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 ATP13A2Q9NQ11 1180 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 TAS2R10Q9NYW0 307 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 WIF1Q9Y5W5 379 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 CHCHD2Q9Y6H1 151 aaPredicted RBP18.68■□□□□ 0.58
SMCO4-203ENST00000526869 PTPRBP23467 1997 aa18.68■□□□□ 0.58
SMCO4-203ENST00000526869 ETV2O00321 342 aaPredicted RBP18.67■□□□□ 0.58
SMCO4-203ENST00000526869 SMNDC1O75940 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMCO4-203ENST00000526869 NUDT14O95848 222 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 ATP6V1B1P15313 513 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 TACR3P29371 465 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 CASP3P42574 277 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 PCYT1AP49585 367 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 POLR2HP52434 150 aaKnown RBP18.67■□□□□ 0.58
SMCO4-203ENST00000526869 CDH15P55291 814 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 ATP1A4Q13733 1029 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 GRINAQ7Z429 371 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 CCDC103Q8IW40 242 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 OR52L1Q8NGH7 329 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 NTNG2Q96CW9 530 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 Q96MT0 163 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 SLC38A2Q96QD8 506 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 TSSK6Q9BXA6 273 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 GPN2Q9H9Y4 310 aaPredicted RBP18.67■□□□□ 0.58
SMCO4-203ENST00000526869 MED17Q9NVC6 651 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 CLN6Q9NWW5 311 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 PPP4R1LQ9P1A2 415 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 SIGLEC7Q9Y286 467 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 PCSK5Q92824 1860 aa18.67■□□□□ 0.58
SMCO4-203ENST00000526869 DPPA5A6NC42 116 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 FAM20BO75063 409 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 PTP4A3O75365 173 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 OR7A10O76100 309 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 HMGN1P05114 100 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 SAGP10523 405 aaPredicted RBP18.66■□□□□ 0.58
SMCO4-203ENST00000526869 EEF1B2P24534 225 aaKnown RBP18.66■□□□□ 0.58
SMCO4-203ENST00000526869 GRK5P34947 590 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 SLC35A2P78381 396 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 EFNB1P98172 346 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 NHLH1Q02575 133 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 OCLNQ16625 522 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 PGGHGQ32M88 737 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 ACSM5Q6NUN0 579 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 SMARCD3Q6STE5 483 aa18.66■□□□□ 0.58
SMCO4-203ENST00000526869 C5orf46Q6UWT4 87 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms