RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 H3BSH0 61 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TNFRSF10AO00220 468 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 SLC22A5O76082 557 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TMEM201Q5SNT2 666 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 ABHD12BQ7Z5M8 362 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 NAXEQ8NCW5 288 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 HOXB13Q92826 284 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 BORCS8Q96FH0 119 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 EGLN2Q96KS0 407 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 C3orf30Q96M34 536 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 CDH20Q9HBT6 801 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 GMDSO60547 372 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TPT1P13693 172 aaKnown RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 GDF1P27539 372 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 RAB5CP51148 216 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 HTRA4P83105 476 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 SPRED1Q7Z699 444 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 SLC37A2Q8TED4 501 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 FAM46BQ96A09 425 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 OR7D2Q96RA2 312 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 CXorf51AA0A1B0GTR3 108 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 RPS2P15880 293 aaKnown RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 GCAP28676 217 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TNFSF8P32971 234 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 OR8K3Q8NH51 312 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 MBNL1Q9NR56 388 aaKnown RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 MAP1BP46821 2468 aaKnown RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 GOSR2O14653 212 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 RAB40BQ12829 278 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 POU4F3Q15319 338 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 RBM24Q9BX46 236 aaKnown RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 NMNAT1Q9HAN9 279 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 PDFQ9HBH1 243 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 COQ3Q9NZJ6 369 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 KNL1Q8NG31 2342 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 POU3F2P20265 443 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 PYCR3Q53H96 274 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 TMEM185AQ8NFB2 350 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 SLC6A7Q99884 636 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 OR5K3A6NET4 321 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 SORBS2O94875 1100 aaKnown RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 IFNA4P05014 189 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 ADH7P40394 386 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 MELKQ14680 651 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 LRRC28Q86X40 367 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 NLGN4YQ8NFZ3 816 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 WBP2Q969T9 261 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 RADILQ96JH8 1075 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 MRGPRX1Q96LB2 322 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 ZDHHC5Q9C0B5 715 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 MEGF11A6BM72 1044 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 C2CD4DB7Z1M9 353 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 SGCEO43556 437 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 ALDOBP05062 364 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 JUNBP17275 347 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 PGFP49763 221 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 LUMP51884 338 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 MLLT11Q13015 90 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 RAB11BQ15907 218 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 WBP2NLQ6ICG8 309 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 PLBD1Q6P4A8 553 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 ACOT11Q8WXI4 607 aaPredicted RBP15.11■□□□□ 0.01
USP42-207ENST00000521713 SAMD8Q96LT4 415 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 SULT4A1Q9BR01 284 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 SPHK1Q9NYA1 384 aa15.11■□□□□ 0.01
USP42-207ENST00000521713 RAD51DO75771 328 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 CPOXP36551 454 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 ACVR1BP36896 505 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 EPHA4P54764 986 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 OTUD1Q5VV17 481 aaPredicted RBP15.1■□□□□ 0.01
USP42-207ENST00000521713 ADAMTS16Q8TE57 1224 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 RAB19A4D1S5 217 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TVP23AA6NH52 213 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 SPDEFO95238 335 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 IFNA10P01566 189 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TCN2P20062 427 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 KCNJ10P78508 379 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 ERV3-1Q14264 604 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 OR8J2Q8NGG1 315 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 MSLNLQ96KJ4 702 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 DPH1Q9BZG8 443 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 FOXQ1Q9C009 403 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 KLK4Q9Y5K2 254 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 SLC5A10A0PJK1 596 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TRIM64A6NGJ6 449 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 GGT3PA6NGU5 568 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TRIM64BA6NI03 449 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 UBFD1O14562 309 aaKnown RBP15.1■□□□□ 0.01
USP42-207ENST00000521713 LINC01565O15544 149 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TNFRSF1BP20333 461 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 THBS2P35442 1172 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 CCR2P41597 374 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 YOD1Q5VVQ6 348 aaPredicted RBP15.1■□□□□ 0.01
USP42-207ENST00000521713 MISPQ8IVT2 679 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 UQCC2Q9BRT2 126 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TARM1B6A8C7 271 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 OR7A17O14581 309 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms