RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ZNF716A6NP11 495 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 IGHV3-9P01782 118 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 PROCP04070 461 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 PGRP06401 933 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 NR4A2P43354 598 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 SESN3P58005 492 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 SWI5Q1ZZU3 235 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 CCDC153Q494R4 210 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 SYT14P1Q58G82 188 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 NATD1Q8N6N6 113 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 TMCO5AQ8N6Q1 288 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 ZNF614Q8N883 585 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 WDR31Q8NA23 367 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 SLC25A43Q8WUT9 341 aaPredicted RBP14.4□□□□□ -0.1
TRAM1-204ENST00000521049 TMEM234Q8WY98 164 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 OR5P2Q8WZ92 322 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 PRR14Q9BWN1 585 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 NMUR2Q9GZQ4 415 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 QRSL1Q9H0R6 528 aaKnown RBP14.4□□□□□ -0.1
TRAM1-204ENST00000521049 CHODLQ9H9P2 273 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 ACER3Q9NUN7 267 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 OXSMQ9NWU1 459 aa14.4□□□□□ -0.1
TRAM1-204ENST00000521049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.4□□□□□ -0.12e-7■■□□□ 12.9
TRAM1-204ENST00000521049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.4□□□□□ -0.114e-7■■□□□ 13.5
TRAM1-204ENST00000521049 AZIN1O14977 448 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 LSM1O15116 133 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 GLRA3O75311 464 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 MRPL33O75394 65 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 LY6HO94772 140 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 BCKDHAP12694 445 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 FKBP2P26885 142 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 NTF4P34130 210 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 RPL3P39023 403 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 CCR4P51679 360 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 RPL38P63173 70 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 PHC1P78364 1004 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 MERTKQ12866 999 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 TP53BP2Q13625 1128 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 MST1LQ2TV78 715 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 IL17RELQ6ZVW7 336 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 TRMT10CQ7L0Y3 403 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 MZB1Q8WU39 189 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 ZHX1-C8orf76Q96EF9 292 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 SDF2Q99470 211 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 PIMREGQ9BSJ6 248 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 C1QTNF6Q9BXI9 259 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 TUBB1Q9H4B7 451 aa14.39□□□□□ -0.11
TRAM1-204ENST00000521049 YLPM1P49750 1951 aaKnown RBP14.39□□□□□ -0.11
TRAM1-204ENST00000521049 PDLIM1O00151 329 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 SCAMP2O15127 329 aaKnown RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 RIPK2O43353 540 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 DNPH1O43598 174 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 PLIN3O60664 434 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 URI1O94763 535 aaPredicted RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 CHEK2O96017 543 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 LINC00032P0C843 101 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 LAMP1P11279 417 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 APEHP13798 732 aaKnown RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 PGCP20142 388 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 HPCAL1P37235 193 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 APOBEC1P41238 236 aaKnown RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 CCT5P48643 541 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 SLC16A1P53985 500 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 SKP2Q13309 424 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 ZNF141Q15928 474 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 LSM12Q3MHD2 195 aaKnown RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 PDZK1Q5T2W1 519 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 C17orf78Q8N4C9 275 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 OR7A2PQ8NGA2 310 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 PIGXQ8TBF5 258 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 MOAP1Q96BY2 351 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 MYOZ1Q9NP98 299 aaPredicted RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 PSMC3IPQ9P2W1 217 aaPredicted RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 AMDHD2Q9Y303 409 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 SPIN1Q9Y657 262 aaPredicted RBP14.38□□□□□ -0.11
TRAM1-204ENST00000521049 FKBP7Q9Y680 259 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 SVEP1Q4LDE5 3571 aa14.38□□□□□ -0.11
TRAM1-204ENST00000521049 A0A1W2PPM1 405 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 LOC390937A0A1W2PQ73 354 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 DUXAA6NLW8 204 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 TMEM114B3SHH9 223 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 CYP7B1O75881 506 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 PMS2P2O95744 297 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 TGFAP01135 160 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 ITGA5P08648 1049 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 TFPIP10646 304 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 CPA3P15088 417 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 CLK1P49759 484 aaKnown RBP14.37□□□□□ -0.11
TRAM1-204ENST00000521049 FOXG1P55316 489 aaPredicted RBP14.37□□□□□ -0.11
TRAM1-204ENST00000521049 WHAMMP3Q1A5X7 153 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 SPDYE7PQ495Y7 208 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 GALNTL6Q49A17 601 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 RFLNBQ8N5W9 214 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 ZNF540Q8NDQ6 660 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 C1orf162Q8NEQ5 155 aaPredicted RBP14.37□□□□□ -0.11
TRAM1-204ENST00000521049 SFXN5Q8TD22 340 aa14.37□□□□□ -0.11
TRAM1-204ENST00000521049 FOXN4Q96NZ1 517 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms