RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 DPRXA6NFQ7 191 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 RNF223E7ERA6 249 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 SULT2B1O00204 365 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
CSMD1-207ENST00000520451 AGR2O95994 175 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 MYZAPP0CAP1 466 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 TFPIP10646 304 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 UQCRC2P22695 453 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 ABCE1P61221 599 aaKnown RBP13.42□□□□□ -0.26
CSMD1-207ENST00000520451 FAPQ12884 760 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 ETFDHQ16134 617 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 TYW3Q6IPR3 259 aaKnown RBP13.42□□□□□ -0.26
CSMD1-207ENST00000520451 MAPK1IP1LQ8NDC0 245 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 SLC25A43Q8WUT9 341 aaPredicted RBP13.42□□□□□ -0.26
CSMD1-207ENST00000520451 RAB8BQ92930 207 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 MUCL1Q96DR8 90 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 TRIM2Q9C040 744 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 LIPT1Q9Y234 373 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 SLC35A3Q9Y2D2 325 aa13.42□□□□□ -0.26
CSMD1-207ENST00000520451 SPIN1Q9Y657 262 aaPredicted RBP13.42□□□□□ -0.26
CSMD1-207ENST00000520451 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 SCN2BO60939 215 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 BCAS1O75363 584 aaPredicted RBP13.41□□□□□ -0.26
CSMD1-207ENST00000520451 GGT1P19440 569 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 COX5AP20674 150 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 IGHV1-2P23083 117 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 RYKP34925 604 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 IDUAP35475 653 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 PGM1P36871 562 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 APOBEC1P41238 236 aaKnown RBP13.41□□□□□ -0.26
CSMD1-207ENST00000520451 KHKP50053 298 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 CDH11P55287 796 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 HPCAP84074 193 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 FUT5Q11128 374 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 PGGHGQ32M88 737 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 TIMM23BQ5SRD1 257 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 ANXA8L1Q5VT79 327 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 ABLIM2Q6H8Q1 611 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 HMGN2P46Q86SG4 172 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 FAM71CQ8NEG0 241 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 OIT3Q8WWZ8 545 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 ROPN1LQ96C74 230 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 ZHX1-C8orf76Q96EF9 292 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 TMEM109Q9BVC6 243 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 CTPS2Q9NRF8 586 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 POLE3Q9NRF9 147 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 CHRNA9Q9UGM1 479 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
CSMD1-207ENST00000520451 CADP27708 2225 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 IGKV3D-15A0A087WSY6 115 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 ANKRD28O15084 1053 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 BIRC5O15392 142 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 RGS16O15492 202 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 RAMP1O60894 148 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 IGHV3-9P01782 118 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 GUSBP08236 651 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 CHI3L1P36222 383 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 ACVR1BP36896 505 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 RPL14P50914 215 aaKnown RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 PHC1P78364 1004 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 KRTAP1-1Q07627 177 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 SPANXN4Q5MJ08 99 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 DNAJC14Q6Y2X3 702 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 UBE2J2Q8N2K1 259 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 TESCQ96BS2 214 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 C20orf27Q9GZN8 174 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 SAP130Q9H0E3 1048 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 ALG2Q9H553 416 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 CISD1Q9NZ45 108 aaKnown RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.26
CSMD1-207ENST00000520451 MARCOQ9UEW3 520 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.4□□□□□ -0.26
CSMD1-207ENST00000520451 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 SHISA9B4DS77 424 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 ABCD4O14678 606 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 RAD51DO75771 328 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 PGM3O95394 542 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 IGHV4-39P01824 125 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 SLC1A6P48664 564 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 CLNS1AP54105 237 aaKnown RBP13.39□□□□□ -0.27
CSMD1-207ENST00000520451 DMTNQ08495 405 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 CASP8Q14790 479 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 PDK3Q15120 406 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 GPAT3Q53EU6 434 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 FBXW9Q5XUX1 488 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
CSMD1-207ENST00000520451 GRINAQ7Z429 371 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms