RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HCN1O60741 890 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CIB2O75838 187 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 DIRAS1O95057 198 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 TBX6O95947 436 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 LALBAP00709 142 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 RNH1P13489 461 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 NCK1P16333 377 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 IL2RGP31785 369 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 SUCLG1P53597 346 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 ATP1B3P54709 279 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC8A3P57103 927 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 BEX3Q00994 111 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 OGDHQ02218 1023 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CHRNB3Q05901 458 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 BST1Q10588 318 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 KLHL38Q2WGJ6 581 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 SBK1Q52WX2 424 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 PAN3Q58A45 887 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRAMEF5Q5TYX0 476 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRAMEF6Q5VXH4 476 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCDC137Q6PK04 289 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 BHLHA9Q7RTU4 235 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 H2BFWTQ7Z2G1 175 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CTAGE6Q86UF2 777 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 GTSCR1Q86UQ5 136 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 TRIM69Q86WT6 500 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CDR2LQ86X02 465 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 C17orf82Q86X59 251 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 EGFL6Q8IUX8 553 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR2L13Q8N349 312 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 GPR137CQ8N3F9 429 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR9K2Q8NGE7 335 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR2A12Q8NGT7 310 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC2A14Q8TDB8 520 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 HTR3CQ8WXA8 447 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 UBE2E3Q969T4 207 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 RASD2Q96D21 266 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 NAF1Q96HR8 494 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CNOT6LQ96LI5 555 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 CHRDL1Q9BU40 450 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 UBXN6Q9BZV1 441 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 YY1AP1Q9H869 796 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 VPS37BQ9H9H4 285 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 POLE4Q9NR33 117 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR1A1Q9P1Q5 309 aa4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 TDRD15B5MCY1 1934 aaKnown RBP4.05□□□□□ -1.76
HMGB1P46-201ENST00000520062 SMIM28A0A1B0GU29 152 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 ARHGEF35A5YM69 484 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 GOLGA8SH3BPF8 625 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 PFKFB2O60825 505 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 LYPD3O95274 346 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 UQCRFS1P1P0C7P4 283 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 POLR2EP19388 210 aaKnown RBP4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 ZP3P21754 424 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 GNA11P29992 359 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 CCR1P32246 355 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 EPHX2P34913 555 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 LEPP41159 167 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 PLK1P53350 603 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 LMO4P61968 165 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC10A7Q0GE19 358 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRR4Q16378 134 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 EIPR1Q53HC9 387 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR2A2Q6IF42 318 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 METAP1DQ6UB28 335 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 DHDDSQ86SQ9 333 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 FAM228AQ86W67 206 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 MARCH9Q86YJ5 346 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 ATP6V0D2Q8N8Y2 350 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 OR1L4Q8NGR5 311 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 SIGLEC12Q96PQ1 595 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 C19orf24Q9BVV8 132 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLITRK2Q9H156 845 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 NHEJ1Q9H9Q4 299 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 RSPH14Q9UHP6 348 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 COPS3Q9UNS2 423 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 PDE10AQ9Y233 779 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 PLLPQ9Y342 182 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 IFT52Q9Y366 437 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 FLVCR1Q9Y5Y0 555 aa4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 COL5A2P05997 1499 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P46-201ENST00000520062 A0A1B0GU03 582 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 A0A1B0GVL5 298 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 IDSB3KWA1 339 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 SGK1O00141 431 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 FOXE1O00358 373 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 MED7O43513 233 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 GATA1P15976 413 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 GCKP35557 465 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 QARSP47897 775 aaKnown RBP4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 ASPHQ12797 758 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 C15orf32Q32M92 178 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 CGB2Q6NT52 195 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 DNM1P46Q6ZS02 220 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 UTS2BQ765I0 119 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 MAGEE2Q8TD90 523 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 MS4A14Q96JA4 679 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms