RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 NEIL3Q8TAT5 605 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 BARD1Q99728 777 aaKnown RBP11.75□□□□□ -0.53
PABPC1-205ENST00000518196 SLX1AQ9BQ83 275 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 KLHDC3Q9BQ90 382 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 UGT2B28Q9BY64 529 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 POLR2J2Q9GZM3 115 aaKnown RBP11.75□□□□□ -0.53
PABPC1-205ENST00000518196 POLR2J3Q9H1A7 115 aaKnown RBP11.75□□□□□ -0.53
PABPC1-205ENST00000518196 SERINC1Q9NRX5 453 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 SLC6A5Q9Y345 797 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 LIPGQ9Y5X9 500 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 V9GYQ6 96 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 ZNF407Q9C0G0 2248 aa11.75□□□□□ -0.53
PABPC1-205ENST00000518196 TLN1Q9Y490 2541 aaKnown RBP11.75□□□□□ -0.53
PABPC1-205ENST00000518196 KMT2BQ9UMN6 2715 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 SVILO95425 2214 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ETV2O00321 342 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 AQP7O14520 342 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ACTL6AO96019 429 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 PRB1P04280 392 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 UMPSP11172 480 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 EDN3P14138 238 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ITGA2P17301 1181 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 TNFRSF1BP20333 461 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 APOBEC1P41238 236 aaKnown RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 POLR2HP52434 150 aaKnown RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 DLX5P56178 289 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 CHRNB3Q05901 458 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 RBPJQ06330 500 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 MERTKQ12866 999 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 FOXF1Q12946 379 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 FAM98BQ52LJ0 330 aaKnown RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 GFRALQ6UXV0 394 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 DEF8Q6ZN54 512 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 CYP4Z1Q86W10 505 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 SPATA24Q86W54 205 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 RBM45Q8IUH3 476 aaKnown RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 LACC1Q8IV20 430 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ZNF843Q8N446 348 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 OR4D11Q8NGI4 311 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 OR5M1Q8NGP8 315 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 DNAJA4Q8WW22 397 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 FAM32AQ9Y421 112 aaKnown RBP11.74□□□□□ -0.53
PABPC1-205ENST00000518196 BSNQ9UPA5 3926 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 GTF3C1Q12789 2109 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 ATRXP46100 2492 aa11.74□□□□□ -0.53
PABPC1-205ENST00000518196 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 TCRBV5S2A0A599 114 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 OR14I1A6ND48 311 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ERICH4A6NGS2 130 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
PABPC1-205ENST00000518196 SHISA8B8ZZ34 492 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 TPST2O60704 377 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 PEPDP12955 493 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 NQO1P15559 274 aaKnown RBP11.73□□□□□ -0.53
PABPC1-205ENST00000518196 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
PABPC1-205ENST00000518196 BMP7P18075 431 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 CXCR1P25024 350 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ELK4P28324 431 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 TACR3P29371 465 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 GFRA1P56159 465 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 B3GALT5-AS1P59052 145 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 RAC1P63000 192 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 NPTX1Q15818 432 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 TMEM44Q2T9K0 475 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 NHSL2Q5HYW2 709 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ZNF613Q6PF04 617 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 UTP4Q969X6 686 aaKnown RBP11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ZNF524Q96C55 264 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 SLC47A1Q96FL8 570 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 SEPHS2Q99611 448 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ADAM19Q9H013 955 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 MAGIXQ9H6Y5 334 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 CTPS2Q9NRF8 586 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ACAD8Q9UKU7 415 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 SPIN1Q9Y657 262 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-205ENST00000518196 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
PABPC1-205ENST00000518196 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 TMED7-TICAM2A0A0A6YYA0 188 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 A0A1B0GWA3 101 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 TRAPPC13A5PLN9 417 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 GJE1A6NN92 205 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 H3BML4 177 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 BCKDKO14874 412 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 WISP2O76076 250 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 NTN1O95631 604 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 FABP3P05413 133 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 PNMTP11086 282 aa11.72□□□□□ -0.53
PABPC1-205ENST00000518196 POU3F2P20265 443 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-205ENST00000518196 FKBP2P26885 142 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms