RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SLC38A4Q969I6 547 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 SNRNP40Q96DI7 357 aaKnown RBP18.98■□□□□ 0.63
LSM6-207ENST00000515311 SFXN2Q96NB2 322 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 NPAS1Q99742 590 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 PIP5K1AQ99755 562 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 CHID1Q9BWS9 393 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 SLC6A15Q9H2J7 730 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 AGPAT4Q9NRZ5 378 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 ARMC1Q9NVT9 282 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 RIMS3Q9UJD0 308 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 ZFYVE26Q68DK2 2539 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 TRGV5A0A0B4J1U4 118 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 A0A1B0GVC2 190 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 NPIPA5E9PKD4 350 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 FFAR1O14842 300 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 CHP2O43745 196 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 FKBP6O75344 327 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 ENTPD5O75356 428 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 TCEA1P23193 301 aaKnown RBP18.97■□□□□ 0.63
LSM6-207ENST00000515311 CDH12P55289 794 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 FOXK1P85037 733 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.97■□□□□ 0.63
LSM6-207ENST00000515311 KRTCAP3Q53RY4 240 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 NHSL2Q5HYW2 709 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 COLEC12Q5KU26 742 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 ZFP1Q6P2D0 407 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 AAGABQ6PD74 315 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 TRILQ7L0X0 811 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 SLC41A3Q96GZ6 507 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 GPR137Q96N19 417 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 SLX1AQ9BQ83 275 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 TSPAN10Q9H1Z9 355 aaPredicted RBP18.97■□□□□ 0.63
LSM6-207ENST00000515311 CTPS2Q9NRF8 586 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 OSGIN1Q9UJX0 560 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 NPIPA1Q9UND3 350 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 AP4S1Q9Y587 144 aa18.97■□□□□ 0.63
LSM6-207ENST00000515311 KALRNO60229 2985 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 ZNF407Q9C0G0 2248 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 TTLL8A6PVC2 850 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 SHISA8B8ZZ34 492 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 J3KTA2 159 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 LYPD3O95274 346 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 WISP1O95388 367 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 ACTL6AO96019 429 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 MT-ND1P03886 318 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 THY1P04216 161 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 FKBP2P26885 142 aaKnown RBP18.96■□□□□ 0.63
LSM6-207ENST00000515311 YAP1P46937 504 aaKnown RBP18.96■□□□□ 0.63
LSM6-207ENST00000515311 ST3GAL3Q11203 375 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 SELENBP1Q13228 472 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 GDF7Q7Z4P5 450 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 ZNF605Q86T29 641 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 ADGRG3Q86Y34 549 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 PIK3C3Q8NEB9 887 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 OR5M1Q8NGP8 315 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 MPP4Q96JB8 637 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 DHRS1Q96LJ7 313 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 FNDC11Q9BVV2 318 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 ANKRD19PQ9H560 264 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 LDAHQ9H6V9 325 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 SERINC1Q9NRX5 453 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 CHRNA9Q9UGM1 479 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 SLC7A7Q9UM01 511 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 LIPGQ9Y5X9 500 aa18.96■□□□□ 0.63
LSM6-207ENST00000515311 SPIN1Q9Y657 262 aaPredicted RBP18.96■□□□□ 0.63
LSM6-207ENST00000515311 A0A087WUJ7 227 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 TMED7-TICAM2A0A0A6YYA0 188 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 ELOA3DA6NLF2 546 aaPredicted RBP18.95■□□□□ 0.62
LSM6-207ENST00000515311 DIRAS1O95057 198 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 CXCR1P25024 350 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 TDGF1P3P51864 188 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 SMIM11AP58511 58 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 ELOA3BQ3SY89 546 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 PRR30Q53SZ7 412 aaPredicted RBP18.95■□□□□ 0.62
LSM6-207ENST00000515311 C3orf33Q6P1S2 294 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 LINC00114Q6XXX2 140 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 ELOA3Q8NG57 546 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 SLC25A43Q8WUT9 341 aaPredicted RBP18.95■□□□□ 0.62
LSM6-207ENST00000515311 NMNAT1Q9HAN9 279 aaPredicted RBP18.95■□□□□ 0.62
LSM6-207ENST00000515311 ASF1BQ9NVP2 202 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 STOML1Q9UBI4 398 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 TMED7Q9Y3B3 224 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 ZNF337Q9Y3M9 751 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 AP4B1Q9Y6B7 739 aa18.95■□□□□ 0.62
LSM6-207ENST00000515311 A0A1W2PRQ8 180 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 AQP7O14520 342 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 ZNF208O43345 1280 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 HNRNPRO43390 633 aaKnown RBP18.94■□□□□ 0.62
LSM6-207ENST00000515311 EFNA2O43921 213 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 H1F0P07305 194 aaKnown RBP18.94■□□□□ 0.62
LSM6-207ENST00000515311 RAC1P63000 192 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 DGCR6Q14129 220 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 TRAM2Q15035 370 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 VASNQ6EMK4 673 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 OR2T5Q6IEZ7 315 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 ARHGAP11AQ6P4F7 1023 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 POMZP3Q6PJE2 187 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 OR2T29Q8NH02 315 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 PYDC1Q8WXC3 89 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 STMN2Q93045 179 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms