RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
NUP54-216ENST00000514901 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
NUP54-216ENST00000514901 CLDN15P56746 228 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 CLDN20P56880 219 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 DMTNQ08495 405 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 SGCBQ16585 318 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 TMEM176BQ3YBM2 270 aaPredicted RBP12.84□□□□□ -0.35
NUP54-216ENST00000514901 EEF1A1P5Q5VTE0 462 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 C16orf89Q6UX73 402 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 GGNQ86UU5 652 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 MBD3L2Q8NHZ7 208 aaPredicted RBP12.84□□□□□ -0.35
NUP54-216ENST00000514901 ITLN2Q8WWU7 325 aaPredicted RBP12.84□□□□□ -0.35
NUP54-216ENST00000514901 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 ADGRG7Q96K78 797 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 ZFP3Q96NJ6 502 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 ADAM19Q9H013 955 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 ALG2Q9H553 416 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 TMEM181Q9P2C4 612 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 ABCD2Q9UBJ2 740 aa12.84□□□□□ -0.35
NUP54-216ENST00000514901 NME4O00746 187 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 TPST1O60507 370 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 IL11P20809 199 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 SLC7A1P30825 629 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 CEACAM8P31997 349 aaPredicted RBP12.83□□□□□ -0.36
NUP54-216ENST00000514901 EIF1AXP47813 144 aaKnown RBP12.83□□□□□ -0.36
NUP54-216ENST00000514901 CPA2P48052 419 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 KCNJ5P48544 419 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 CARD18P57730 90 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 OR2A2Q6IF42 318 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 ADGRG3Q86Y34 549 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 PGAM4Q8N0Y7 254 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 RPRMLQ8N4K4 120 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 ZNF559Q9BR84 538 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 TRIM2Q9C040 744 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 TMEM185BQ9H7F4 350 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 CTPS2Q9NRF8 586 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 ADA2Q9NZK5 511 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 CLCF1Q9UBD9 225 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
NUP54-216ENST00000514901 MCTS1Q9ULC4 181 aaKnown RBP12.83□□□□□ -0.36
NUP54-216ENST00000514901 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 DOCK7Q96N67 2140 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TMED7-TICAM2A0A0A6YYA0 188 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 A0A0G2JNJ9 132 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 A0A0J9YW62 118 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 H0YC42 278 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TNFSF11O14788 317 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 GSTA4O15217 222 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 ZNF208O43345 1280 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 FMO6PO60774 539 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 RCBTB2O95199 551 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 SYNGR4O95473 234 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 FCGR2AP12318 317 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 CALB2P22676 271 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TACR3P29371 465 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 KDELR2P33947 212 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 SFTPDP35247 375 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 GSK3BP49841 420 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 RGS8P57771 180 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 NCALDP61601 193 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 MXRA7P84157 204 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 DUSP7Q16829 419 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 CTU2Q2VPK5 515 aaKnown RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 SPATS1Q496A3 300 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TRPM8Q7Z2W7 1104 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 RANBP3LQ86VV4 465 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 CADM2Q8N3J6 435 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 LSMEM1Q8N8F7 131 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 SMYD1Q8NB12 490 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 ATP6V1C2Q8NEY4 427 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 LILRB4Q8NHJ6 448 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 PROX1Q92786 737 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 OSTF1Q92882 214 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TAMM41Q96BW9 452 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 SDCCAG3Q96C92 435 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 PSMG3-AS1Q96PY0 264 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 KCTD14Q9BQ13 255 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 RSPO3Q9BXY4 272 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 C12orf10Q9HB07 376 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TMEM27Q9HBJ8 222 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 RPS6KB2Q9UBS0 482 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 ZNF629Q9UEG4 869 aaPredicted RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 Q9UFV3 132 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TESQ9UGI8 421 aaKnown RBP12.82□□□□□ -0.36
NUP54-216ENST00000514901 OSGIN1Q9UJX0 560 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 RNF6Q9Y252 685 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 TMED7Q9Y3B3 224 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 HDGFL3Q9Y3E1 203 aa12.82□□□□□ -0.36
NUP54-216ENST00000514901 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms