RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TMEM72A0PK05 275 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ZC3H12DA2A288 527 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 C7orf72A4D263 438 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 CPSF4LA6NMK7 179 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 J3QKU1 62 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 EIF1AYO14602 144 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 PRRG2O14669 202 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 TNFSF11O14788 317 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 BCKDKO14874 412 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 LGI1O95970 557 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ACTL6AO96019 429 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 RNF224P0DH78 156 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ZNF708P17019 499 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 KLK2P20151 261 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 TACR3P29371 465 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 GCKP35557 465 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 CLDN15P56746 228 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 BNIP2Q12982 314 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 NRF1Q16656 503 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 GXYLT1Q4G148 440 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 DNAL1Q4LDG9 190 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 NHSL2Q5HYW2 709 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 WLSQ5T9L3 541 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 PPP4R4Q6NUP7 873 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ENPP6Q6UWR7 440 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 RPTNQ6XPR3 784 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 DEF8Q6ZN54 512 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 FJX1Q86VR8 437 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 DOLPP1Q86YN1 238 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 P3H2Q8IVL5 708 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ZNF440Q8IYI8 595 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ULK2Q8IYT8 1036 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 OR52E4Q8NGH9 312 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 RNF217Q8TC41 542 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ST8SIA1Q92185 356 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 PROX1Q92786 737 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 DTNBP1Q96EV8 351 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 MRGPRX4Q96LA9 322 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 TUBA1CQ9BQE3 449 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 OCSTAMPQ9BR26 566 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 BTBD10Q9BSF8 475 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 CADM1Q9BY67 442 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 OR11A1Q9GZK7 315 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ARMC7Q9H6L4 198 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 ACER3Q9NUN7 267 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 KLHL28Q9NXS3 571 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 TESQ9UGI8 421 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 MAGEL2Q9UJ55 1249 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 PRPF19Q9UMS4 504 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 ZNF835Q9Y2P0 537 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 MRPS18CQ9Y3D5 142 aaKnown RBP8.83□□□□□ -1
TOPBP1-209ENST00000513818 GTF3C1Q12789 2109 aa8.83□□□□□ -1
TOPBP1-209ENST00000513818 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 A0A0J9YW62 118 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 OR14I1A6ND48 311 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 SYT5O00445 386 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 LRRTM2O43300 516 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 SEMA7AO75326 666 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 UQCRBP14927 111 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 FUT4P22083 530 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 ME2P23368 584 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 CHMP24386 653 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 ELK4P28324 431 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 CA7P43166 264 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 YAP1P46937 504 aaKnown RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 EIF1AXP47813 144 aaKnown RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 COPZ1P61923 177 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 MS4A2Q01362 244 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 SELENBP1Q13228 472 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 OR1Q1Q15612 314 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 FXNQ16595 210 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 CTU2Q2VPK5 515 aaKnown RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 ACSF3Q4G176 576 aaPredicted RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 SLC25A53Q5H9E4 307 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 ENTPD8Q5MY95 495 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 C1orf185Q5T7R7 199 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 RTL6Q6ICC9 239 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 WBP2NLQ6ICG8 309 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 Q6ZPB1 254 aaPredicted RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 CCDC121Q6ZUS5 278 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 CBLL1Q75N03 491 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 GRINAQ7Z429 371 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 LILRA2Q8N149 483 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 MARVELD2Q8N4S9 558 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 TNIP2Q8NFZ5 429 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 TMEM234Q8WY98 164 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 C3orf49Q96BT1 292 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 KLHL15Q96M94 604 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 NSMCE2Q96MF7 247 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 TRIB1Q96RU8 372 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 MCHR1Q99705 422 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 PRDM14Q9GZV8 571 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 C1orf21Q9H246 121 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 COQ10BQ9H8M1 238 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 HHATLQ9HCP6 504 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 SRA1Q9HD15 236 aaKnown RBP8.82□□□□□ -1
TOPBP1-209ENST00000513818 ADPRHL2Q9NX46 363 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 OSGIN1Q9UJX0 560 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms