RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 M0R3H8 397 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 AP3D1O14617 1153 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ACOT8O14734 319 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 NTN1O95631 604 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ACTL6AO96019 429 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 PRB1P04280 392 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 PRG2P13727 222 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 TCEA1P23193 301 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 APOBEC1P41238 236 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC1A3P43003 542 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 IDH2P48735 452 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 GFRA1P56159 465 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 SESN3P58005 492 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 MS4A2Q01362 244 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 RBPJQ06330 500 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 FOXF1Q12946 379 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 SELENBP1Q13228 472 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 TOMM34Q15785 309 aaPredicted RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 TMEM44Q2T9K0 475 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 NHSL2Q5HYW2 709 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 WBP2NLQ6ICG8 309 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 C3orf33Q6P1S2 294 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ENPP6Q6UWR7 440 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 CYP2R1Q6VVX0 501 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 TRILQ7L0X0 811 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 VTCN1Q7Z7D3 282 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 YRDCQ86U90 279 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 CARM1Q86X55 608 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 LSMEM1Q8N8F7 131 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 OR6T1Q8NGN1 323 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 VANGL1Q8TAA9 524 aaPredicted RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 SARAFQ96BY9 339 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 MCHR1Q99705 422 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF559Q9BR84 538 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 TRIM2Q9C040 744 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 POLR2J2Q9GZM3 115 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 POLR2J3Q9H1A7 115 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 STOML1Q9UBI4 398 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 RPS6KB2Q9UBS0 482 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 POMPQ9Y244 141 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
HMGXB3-204ENST00000513318 A0A0B4J2E0 115 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 A0A1B0GTH9 108 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 A0A1B0GX12 115 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 TCRBV5S2A0A599 114 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 OR2M5A3KFT3 312 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 AQP12BA6NM10 295 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 H3BML4 177 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 BCKDKO14874 412 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 CIB2O75838 187 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PRKD3O94806 890 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SEMG1P04279 462 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 IFNW1P05000 195 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PEPDP12955 493 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 HOXB6P17509 224 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 BMP7P18075 431 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 TNFRSF1BP20333 461 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PSMA4P25789 261 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 HTR2AP28223 471 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 IFNA8P32881 189 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 OR1E2P47887 323 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 POLR2HP52434 150 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 MAP2K6P52564 334 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 B3GALT5-AS1P59052 145 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 TAS2R41P59536 307 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 RAC1P63000 192 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 HOXC5Q00444 222 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 HSF1Q00613 529 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 TLE1Q04724 770 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 CRYZQ08257 329 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 MERTKQ12866 999 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 OR1Q1Q15612 314 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 NPTX1Q15818 432 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 ENTPD8Q5MY95 495 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 VASNQ6EMK4 673 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF613Q6PF04 617 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 GFRALQ6UXV0 394 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 DEF8Q6ZN54 512 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PLEKHM3Q6ZWE6 761 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 LACC1Q8IV20 430 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 AQP12AQ8IXF9 295 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PM20D2Q8IYS1 436 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 CADM2Q8N3J6 435 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 FAM86B1Q8N7N1 296 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 OR4D11Q8NGI4 311 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 OR10Q1Q8NGQ4 319 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 POC1BQ8TC44 478 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 ADAMTS16Q8TE57 1224 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PHF10Q8WUB8 498 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 DNAJA4Q8WW22 397 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 ABTB1Q969K4 478 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 MIB2Q96AX9 1013 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 C3orf49Q96BT1 292 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms