RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 KLHL24Q6TFL4 600 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 CASP12Q6UXS9 341 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 TMPPEQ6ZT21 453 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 EIF1ADQ8N9N8 165 aaKnown RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 LINC01356Q8N9X3 169 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 WDR31Q8NA23 367 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 OR5W2Q8NH69 310 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 GCDHQ92947 438 aaPredicted RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 ZMYND19Q96E35 227 aaPredicted RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 TSSK3Q96PN8 268 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 FMO2Q99518 471 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 METTL17Q9H7H0 456 aaPredicted RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 MYOZ1Q9NP98 299 aaPredicted RBP13.96□□□□□ -0.17
DDR1-269ENST00000512725 ZDHHC18Q9NUE0 388 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 AMDHD2Q9Y303 409 aa13.96□□□□□ -0.17
DDR1-269ENST00000512725 ZNF264O43296 627 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 SKAP2O75563 359 aaPredicted RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 RSL1D1O76021 490 aaKnown RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 SNUPNO95149 360 aaKnown RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 ITGA5P08648 1049 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 UBL4AP11441 157 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 CREB1P16220 341 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 IL2RGP31785 369 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 CHN2P52757 468 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 PRKAA2P54646 552 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 ATP12AP54707 1039 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 MTDHQ86UE4 582 aaKnown RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 SGMS2Q8NHU3 365 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 ADAMTS15Q8TE58 950 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 FAM120BQ96EK7 910 aaKnown RBP13.95□□□□□ -0.18
DDR1-269ENST00000512725 MUS81Q96NY9 551 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 PIGUQ9H490 435 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 SLC17A5Q9NRA2 495 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 DTNAQ9Y4J8 743 aa13.95□□□□□ -0.18
DDR1-269ENST00000512725 GPR171O14626 319 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 KLF11O14901 512 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 SERPINF1P36955 418 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 SLC25A3Q00325 362 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 CCNIQ14094 377 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 SPDYE7PQ495Y7 208 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 SYT14P1Q58G82 188 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 SLC25A53Q5H9E4 307 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 ABLIM2Q6H8Q1 611 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 PIGXQ8TBF5 258 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDR1-269ENST00000512725 L3HYPDHQ96EM0 354 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 STACQ99469 402 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 RHOXF2Q9BQY4 288 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 RAB1BQ9H0U4 201 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 CDC42EP4Q9H3Q1 356 aaKnown RBP13.94□□□□□ -0.18
DDR1-269ENST00000512725 GSTO2Q9H4Y5 243 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 DUSP22Q9NRW4 184 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 BAIAP2L1Q9UHR4 511 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 FAF1Q9UNN5 650 aaPredicted RBP13.94□□□□□ -0.18
DDR1-269ENST00000512725 FIS1Q9Y3D6 152 aa13.94□□□□□ -0.18
DDR1-269ENST00000512725 IGKV3D-15A0A087WSY6 115 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 STAMBPO95630 424 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 WNT11O96014 354 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 SESN3P58005 492 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 OR2B6P58173 313 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 PRPS1P60891 318 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 PDZK1Q5T2W1 519 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 TRIM46Q7Z4K8 759 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 CCDC103Q8IW40 242 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 ACTRT3Q9BYD9 372 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 ACSS1Q9NUB1 689 aaPredicted RBP13.93□□□□□ -0.18
DDR1-269ENST00000512725 C1orf109Q9NX04 203 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 MALT1Q9UDY8 824 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 PTGDR2Q9Y5Y4 395 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 KCNE3Q9Y6H6 103 aa13.93□□□□□ -0.18
DDR1-269ENST00000512725 ZNF716A6NP11 495 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 EIF4E2O60573 245 aaKnown RBP13.92□□□□□ -0.18
DDR1-269ENST00000512725 ERCC1P07992 297 aaPredicted RBP13.92□□□□□ -0.18
DDR1-269ENST00000512725 OR4A8P0C604 315 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 DAOP14920 347 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 CCNA2P20248 432 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 NTF4P34130 210 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 MAGEA8P43361 318 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 TGFBR3Q03167 851 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 PDK3Q15120 406 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 GPR68Q15743 365 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 CFAP157Q5JU67 520 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 CNPY4Q8N129 248 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 ZNF563Q8TA94 476 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 ZNF180Q9UJW8 692 aa13.92□□□□□ -0.18
DDR1-269ENST00000512725 SPIN1Q9Y657 262 aaPredicted RBP13.92□□□□□ -0.18
DDR1-269ENST00000512725 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
DDR1-269ENST00000512725 B9A039 149 aa13.91□□□□□ -0.18
DDR1-269ENST00000512725 SLC28A1O00337 649 aa13.91□□□□□ -0.18
DDR1-269ENST00000512725 UBTFL6P0CB48 400 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms