RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 GIMAP5Q96F15 307 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 MUS81Q96NY9 551 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 SORCS2Q96PQ0 1159 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 THUMPD3Q9BV44 507 aaKnown RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 ACTRT3Q9BYD9 372 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 BHLHE41Q9C0J9 482 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 RAB1BQ9H0U4 201 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 CDC42EP4Q9H3Q1 356 aaKnown RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 ANKZF1Q9H8Y5 726 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 DUSP22Q9NRW4 184 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 ACSS1Q9NUB1 689 aaPredicted RBP9.08□□□□□ -0.96
MBD4-208ENST00000509828 PARPBPQ9NWS1 579 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 BAIAP2L1Q9UHR4 511 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 MOKQ9UQ07 419 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 FIS1Q9Y3D6 152 aa9.08□□□□□ -0.96
MBD4-208ENST00000509828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
MBD4-208ENST00000509828 CADP27708 2225 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 LRP5LA4QPB2 252 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 CFLARO15519 480 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 H6PDO95479 791 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 CHEK2O96017 543 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 UROSP10746 265 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 PGCP20142 388 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 CCNA2P20248 432 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 PCMT1P22061 227 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 APEX1P27695 318 aaKnown RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 SERPINF1P36955 418 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 HPCAL1P37235 193 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 CCT3P49368 545 aaKnown RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 OR2B6P58173 313 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 NAA20P61599 178 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 PDK3Q15120 406 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 GPR68Q15743 365 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 ZNF385BQ569K4 471 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 SYT14P1Q58G82 188 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 VHLLQ6RSH7 139 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 RINLQ6ZS11 566 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 CCDC63Q8NA47 563 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 OR56A1Q8NGH5 318 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 OR52E4Q8NGH9 312 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 SLC25A43Q8WUT9 341 aaPredicted RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 GCDHQ92947 438 aaPredicted RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 ZMYND19Q96E35 227 aaPredicted RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 FAM120BQ96EK7 910 aaKnown RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 METTL2AQ96IZ6 378 aaKnown RBP9.07□□□□□ -0.96
MBD4-208ENST00000509828 CCT7Q99832 543 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 KCNF1Q9H3M0 494 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 GSTO2Q9H4Y5 243 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 ZDHHC18Q9NUE0 388 aa9.07□□□□□ -0.96
MBD4-208ENST00000509828 SERINC4A6NH21 518 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 KLF11O14901 512 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 TBX19O60806 448 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 CSTAP01040 98 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 CRYAAP02489 173 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 RYKP34925 604 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 ASMTP46597 345 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 SESN3P58005 492 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 RPL38P63173 70 aaKnown RBP9.06□□□□□ -0.96
MBD4-208ENST00000509828 SCGB2A2Q13296 93 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 LSM12Q3MHD2 195 aaKnown RBP9.06□□□□□ -0.96
MBD4-208ENST00000509828 GALNTL6Q49A17 601 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 SLC25A53Q5H9E4 307 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.06□□□□□ -0.96
MBD4-208ENST00000509828 PDZK1Q5T2W1 519 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 SHQ1Q6PI26 577 aaKnown RBP9.06□□□□□ -0.96
MBD4-208ENST00000509828 UGT2A3Q6UWM9 527 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 C17orf78Q8N4C9 275 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 WDR31Q8NA23 367 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 SGMS2Q8NHU3 365 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 ST8SIA1Q92185 356 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 MTERF3Q96E29 417 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 NAA11Q9BSU3 229 aaPredicted RBP9.06□□□□□ -0.96
MBD4-208ENST00000509828 FUT8Q9BYC5 575 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 BPESC1Q9GZL8 116 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 LAT2Q9GZY6 243 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 METTL17Q9H7H0 456 aaPredicted RBP9.06□□□□□ -0.96
MBD4-208ENST00000509828 SLC17A5Q9NRA2 495 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 DCDC2Q9UHG0 476 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
MBD4-208ENST00000509828 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 B9A039 149 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 ANKRD28O15084 1053 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 ITGA5P08648 1049 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 LINC00032P0C843 101 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 UBTFL6P0CB48 400 aaPredicted RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 SDC1P18827 310 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 SOAT1P35610 550 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 RPL3P39023 403 aaKnown RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 APOBEC1P41238 236 aaKnown RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 SLC1A3P43003 542 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 UBE2NP61088 152 aaKnown RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 CLEC6AQ6EIG7 209 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 ABLIM2Q6H8Q1 611 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 TIFABQ6ZNK6 161 aa9.05□□□□□ -0.96
MBD4-208ENST00000509828 EIF3MQ7L2H7 374 aaKnown RBP9.05□□□□□ -0.96
MBD4-208ENST00000509828 RELL1Q8IUW5 271 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms