RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 FRMD8P1Q9BZ68 369 aaPredicted RBP3.32□□□□□ -1.88
RNF4-211ENST00000509206 TPK1Q9H3S4 243 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 PALMDQ9NP74 551 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 MBNL3Q9NUK0 354 aaKnown RBP3.32□□□□□ -1.88
RNF4-211ENST00000509206 AURKAIP1Q9NWT8 199 aaPredicted RBP3.32□□□□□ -1.88
RNF4-211ENST00000509206 PLEK2Q9NYT0 353 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 SENP1Q9P0U3 644 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 CTNNAL1Q9UBT7 734 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 UTS2RQ9UKP6 389 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 ICAM5Q9UMF0 924 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 ABCG2Q9UNQ0 655 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 MED16Q9Y2X0 877 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 NOSIPQ9Y314 301 aaKnown RBP3.32□□□□□ -1.88
RNF4-211ENST00000509206 AUP1Q9Y679 476 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 ZNF780BQ9Y6R6 833 aa3.32□□□□□ -1.88
RNF4-211ENST00000509206 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 EXPH5Q8NEV8 1989 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 A0A1W2PS29 197 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NPEPPSL1A6NEC2 478 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 OR6C65A6NJZ3 312 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 SDR42E2A6NKP2 422 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NUDT19A8MXV4 375 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 KLF11O14901 512 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 WNT9BO14905 357 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 PAX4O43316 350 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 HOXA3O43365 443 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 TPD52L2O43399 206 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 RGS14O43566 566 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 FADS1O60427 444 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 STK16O75716 305 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 KRT33AO76009 404 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 PPP1R3DO95685 299 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NUDT14O95848 222 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TBX6O95947 436 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 OPN1MWP04001 364 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 GBAP04062 536 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 OPN1MW2P0DN77 364 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 OPN1MW3P0DN78 364 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 HPGDP15428 266 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 FAHP16930 419 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 COX5AP20674 150 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 S1PR1P21453 382 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CTNNA1P35221 906 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 EIF1P41567 113 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 CASP2P42575 452 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 MANFP55145 182 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 CDKN2DP55273 166 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 ERVFRD-1P60508 538 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 UBE2NP61088 152 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 LMO4P61968 165 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 LCN2P80188 198 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 MRPS35P82673 323 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 CDKL1Q00532 357 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 SNX1Q13596 522 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NR1I3Q14994 352 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 GABRA6Q16445 453 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 PRICKLE4Q2TBC4 344 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 C18orf21Q32NC0 220 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 GFOD2Q3B7J2 385 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TRMT12Q53H54 448 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 HSP90AA5PQ58FG0 334 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CT83Q5H943 113 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CCNYL2Q5T2Q4 361 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 AVPI1Q5T686 147 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 AADACL2Q6P093 401 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 C4orf22Q6V702 233 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 Q6ZTK2 550 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 ZNF771Q7L3S4 317 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TRABD2AQ86V40 505 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CARM1Q86X55 608 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NUDT13Q86X67 352 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 WDFY1Q8IWB7 410 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 BCL6BQ8N143 479 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 TXLNBQ8N3L3 684 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TCAIMQ8N3R3 496 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 C17orf78Q8N4C9 275 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NKAPQ8N5F7 415 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 RNF10Q8N5U6 811 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 TMCO5AQ8N6Q1 288 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 UBL4BQ8N7F7 174 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 GLB1L3Q8NCI6 653 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 HIPK4Q8NE63 616 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 ABHD4Q8TB40 342 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 SLC35B2Q8TB61 432 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 KLHL29Q96CT2 875 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 MUS81Q96NY9 551 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 GBP4Q96PP9 640 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 DOK1Q99704 481 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 SRXN1Q9BYN0 137 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 TRIM5Q9C035 493 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CENPHQ9H3R5 247 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 CXorf36Q9H7Y0 433 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 NHEJ1Q9H9Q4 299 aaPredicted RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 BCO1Q9HAY6 547 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 C3orf14Q9HBI5 128 aa3.31□□□□□ -1.88
RNF4-211ENST00000509206 PPANQ9NQ55 473 aaKnown RBP3.31□□□□□ -1.88
RNF4-211ENST00000509206 SLC17A5Q9NRA2 495 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms