RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CHMP24386 653 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 HTR2AP28223 471 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 P2RX1P51575 399 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 AGFG1P52594 562 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 PSMD4P55036 377 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 SUMO3P55854 103 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 RAC1P63000 192 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 HOXC5Q00444 222 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 SRYQ05066 204 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 C17orf67Q0P5P2 114 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 PMPCAQ10713 525 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 SNTB1Q13884 538 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 QPRTQ15274 297 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 NPTX1Q15818 432 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF630Q2M218 657 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 GPAT3Q53EU6 434 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 RABL3Q5HYI8 236 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 WLSQ5T9L3 541 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 RIPPLY2Q5TAB7 128 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 VWA1Q6PCB0 445 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 C16orf62Q7Z3J2 963 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 CALHM3Q86XJ0 350 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 LACC1Q8IV20 430 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 UBQLNLQ8IYU4 475 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 CLIP4Q8N3C7 705 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 ARFGAP2Q8N6H7 521 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 FNDC9Q8TBE3 224 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 RCN3Q96D15 328 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 ANKRD27Q96NW4 1050 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 TRNT1Q96Q11 434 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 TRIB1Q96RU8 372 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 CGREF1Q99674 301 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 SIKE1Q9BRV8 207 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 EXO5Q9H790 373 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 POLE3Q9NRF9 147 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 P2RX2Q9UBL9 471 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 ACAD8Q9UKU7 415 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 PCDHGB3Q9Y5G1 929 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 PKDREJQ9NTG1 2253 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ZC3H12DA2A288 527 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CDHR4A6H8M9 788 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 PRSS44E7EML9 344 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 DYNC1I1O14576 645 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TNFSF11O14788 317 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF264O43296 627 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CXCL13O43927 109 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 SNX3O60493 162 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 LYPD3O95274 346 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CLDN14O95500 239 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 THY1P04216 161 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 GKN3PP0CG01 181 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TROVE2P10155 538 aaKnown RBP eCLIP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 GPX2P18283 190 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CD247P20963 164 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ATP6V1C1P21283 382 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 AQP1P29972 269 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ACAA2P42765 397 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CRATP43155 626 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CCR4P51679 360 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 SESN3P58005 492 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 KRTAP10-9P60411 292 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 GNGT1P63211 74 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 DMTNQ08495 405 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 EPS8Q12929 822 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ART3Q13508 389 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TRMT5Q32P41 509 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 NKAPLQ5M9Q1 402 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 GCNT6Q5T4J0 391 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 RNF220Q5VTB9 566 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 FOXB2Q5VYV0 432 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 BHLHB9Q6PI77 547 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 PLEKHM3Q6ZWE6 761 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 SPATA21Q7Z572 469 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 MTERF4Q7Z6M4 381 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 SERPINA11Q86U17 422 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 MISPQ8IVT2 679 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TMCO5AQ8N6Q1 288 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 OR5W2Q8NH69 310 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ZPLD1Q8TCW7 415 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 WDR60Q8WVS4 1066 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TAMM41Q96BW9 452 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 DNAJA3Q96EY1 480 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 ELAC2Q9BQ52 826 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 GPATCH1Q9BRR8 931 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 THUMPD3Q9BV44 507 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 OR11A1Q9GZK7 315 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 LAT2Q9GZY6 243 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 KAT8Q9H7Z6 458 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 RMND5AQ9H871 391 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 BCL2L10Q9HD36 194 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 EXOSC3Q9NQT5 275 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 TMEM45AQ9NWC5 275 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 JKAMPQ9P055 326 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 SUCOQ9UBS9 1254 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms