RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 COL14A1Q05707 1796 aaKnown RBP6.74□□□□□ -1.33
LIMCH1-207ENST00000508466 CELSR3Q9NYQ7 3312 aa6.74□□□□□ -1.33
LIMCH1-207ENST00000508466 C13orf42A0A1B0GVH6 325 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A1W2PRB8 838 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 OR2M5A3KFT3 312 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 C5orf52A6NGY3 159 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 M0R036 132 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TCAPO15273 167 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PRODHO43272 600 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 GATCO43716 136 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 DOK2O60496 412 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ALOX12BO75342 701 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SNAPINO95295 136 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RHOP08100 348 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NME2P22392 152 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 DGKAP23743 735 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 EDNRBP24530 442 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 LAP3P28838 519 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RBMS1P29558 406 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NAA10P41227 235 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PPIAP62937 165 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 GAMTQ14353 236 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RAB41Q5JT25 222 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 USP50Q70EL3 339 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PLPPR4Q7Z2D5 763 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ASPGQ86U10 573 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NKAIN4Q8IVV8 208 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 AVL9Q8NBF6 648 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NAXEQ8NCW5 288 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 OR4E2Q8NGC2 313 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 CASTOR1Q8WTX7 329 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 VOPP1Q96AW1 172 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PPCDCQ96CD2 204 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TMEM169Q96HH4 297 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SAMD8Q96LT4 415 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 IFT27Q9BW83 186 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SELENOIQ9C0D9 397 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 HINT3Q9NQE9 182 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TAS2R10Q9NYW0 307 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 EPHA6Q9UF33 1036 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SH2B3Q9UQQ2 575 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 FARSAQ9Y285 508 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF337Q9Y3M9 751 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 HTTP42858 3142 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A0G2JK05 382 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 METTL12A8MUP2 240 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF879B4DU55 563 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 M0QYG6 137 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 IMPA2O14732 288 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 CA12O43570 354 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 OR10H2O60403 315 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ADAP00813 363 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 C4BPBP20851 252 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 CD80P33681 288 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RBM34P42696 430 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RAP2BP61225 183 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 BEX3Q00994 111 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 MTAPQ13126 283 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TRAM1Q15629 374 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 UPP1Q16831 310 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 C4orf17Q53FE4 359 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 MRM1Q6IN84 353 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TSSK4Q6SA08 328 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ALKAL1Q6UXT8 129 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 KCTD9Q7L273 389 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 UMODL1-AS1Q8N2C9 162 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 UBAC2Q8NBM4 344 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PCSK9Q8NBP7 692 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 OR10D4PQ8NGN7 298 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 BBS4Q96RK4 519 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 TRIB3Q96RU7 358 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 GPR55Q9Y2T6 319 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 MMP24Q9Y5R2 645 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ZFP37Q9Y6Q3 630 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 DSPPQ9NZW4 1301 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SCN4AP35499 1836 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A087WUU8 490 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 A0A1B0GTH9 108 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 BTBD17A6NE02 478 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RHPN2P1A8MT19 583 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 WASH4PA8MWX3 477 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PPM1DO15297 605 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 RPP14O95059 124 aaKnown RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 F2P00734 622 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 IFNA4P05014 189 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 CD2P06729 351 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 IL3P08700 152 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SMIM6P0DI80 62 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 C8orf89P0DMQ9 161 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ZNF7P17097 686 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 MPGP29372 298 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 PXNP49023 591 aaPredicted RBP6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NUBP1P53384 320 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ATP1B3P54709 279 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 SSTP61278 116 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 ECH1Q13011 328 aa6.73□□□□□ -1.33
LIMCH1-207ENST00000508466 NKPD1Q17RQ9 610 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms