RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ZNF440Q8IYI8 595 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 DPP10Q8N608 796 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 ZNF614Q8N883 585 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 TMEM234Q8WY98 164 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 SLC35B4Q969S0 331 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 VPS33AQ96AX1 596 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 MRGPRX4Q96LA9 322 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 WFIKKN1Q96NZ8 548 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 TRIB1Q96RU8 372 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 C19orf24Q9BVV8 132 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 SFXN3Q9BWM7 321 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 TMEM120AQ9BXJ8 343 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 PAIP1Q9H074 479 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 NSRP1Q9H0G5 558 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 ZNF385DQ9H6B1 395 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 EVA1AQ9H8M9 152 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 MED17Q9NVC6 651 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 FBXO34Q9NWN3 711 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 ICAM5Q9UMF0 924 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 NDUFAF1Q9Y375 327 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 SPIN1Q9Y657 262 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 KCNE3Q9Y6H6 103 aa8.25□□□□□ -1.09
UBE2D3-223ENST00000508249 A0A096LNT2 108 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 A0A0G2JPF8 293 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 AGAP5A6NIR3 686 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HNRNPCL3B7ZW38 293 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 CLIC1O00299 241 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 FCMRO60667 390 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HNRNPCL1O60812 293 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 DNAJA2O60884 412 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 TNFRSF21O75509 655 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 H6PDO95479 791 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 NUDT14O95848 222 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 NPPAP01160 153 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 GSNP06396 782 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 THBS1P07996 1170 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 LINGO3P0C6S8 592 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 PABPC4LP0CB38 370 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HNRNPCL4P0DMR1 293 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 TMIGD3P0DMS9 266 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HOXB9P17482 250 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 FPR1P21462 350 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 RPS4Y1P22090 263 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 HTR3AP46098 478 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 MAP2K6P52564 334 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 MVDP53602 400 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 GUCY1A3Q02108 690 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 ZNF117Q03924 483 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 FUT5Q11128 374 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SELENBP1Q13228 472 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 RGNQ15493 299 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 LIN52Q52LA3 116 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 DNM1P46Q6ZS02 220 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 ESPNLQ6ZVH7 1005 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 GALNT10Q86SR1 603 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SLC30A8Q8IWU4 369 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 CLEC4FQ8N1N0 589 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 GATSQ8NAP1 163 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 FAM71CQ8NEG0 241 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 BHLHE22Q8NFJ8 381 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 RFWD2Q8NHY2 731 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 BBS10Q8TAM1 723 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SLC25A43Q8WUT9 341 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 WDR60Q8WVS4 1066 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 RAB8BQ92930 207 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 PIK3IP1Q96FE7 263 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SH3YL1Q96HL8 342 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SH3GL1Q99961 368 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SPATA5L1Q9BVQ7 753 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 RTN4RQ9BZR6 473 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 SLC38A1Q9H2H9 487 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 BCL2L10Q9HD36 194 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 A4GALTQ9NPC4 353 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 CLCF1Q9UBD9 225 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 MKLN1Q9UL63 735 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 VDAC3Q9Y277 283 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 IFT52Q9Y366 437 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 PCDHB14Q9Y5E9 798 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 CMYA5Q8N3K9 4069 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 DSPPQ9NZW4 1301 aa8.24□□□□□ -1.09
UBE2D3-223ENST00000508249 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 A8MXE2 369 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 B4DXG7 233 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 C5orf58C9J3I9 102 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 FAAHO00519 579 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 ADAMDEC1O15204 470 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 TLX2O43763 284 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 CCDC22O60826 627 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 RCBTB2O95199 551 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 IFNA2P01563 188 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 FAM157CP0CG43 387 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 ETS2P15036 469 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 IL7RP16871 459 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 PGM1P36871 562 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 PCYT1AP49585 367 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 KCNJ10P78508 379 aa8.23□□□□□ -1.09
UBE2D3-223ENST00000508249 CHRNEQ04844 493 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms