RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 RAC3P60763 192 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 SF3A3Q12874 501 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 EPS8Q12929 822 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 DAZAP2Q15038 168 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 HSP90B2PQ58FF3 399 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 SYT14P1Q58G82 188 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 DLEU7Q6UYE1 221 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 FCRLAQ7L513 359 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 RETREG3Q86VR2 466 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 ADGRG3Q86Y34 549 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 SLC25A43Q8WUT9 341 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 REXO5Q96IC2 774 aaKnown RBP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 GLRX2Q9NS18 164 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-215ENST00000507874 CHST2Q9Y4C5 530 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 GMEB1Q9Y692 573 aa13.48□□□□□ -0.25
CLDND1-215ENST00000507874 CDHR4A6H8M9 788 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 CFAP73A6NFT4 308 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 A6NNC1 897 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 FAAHO00519 579 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 THBS1P07996 1170 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
CLDND1-215ENST00000507874 GKN3PP0CG01 181 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLDND1-215ENST00000507874 ARAFP10398 606 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 POU2F1P14859 743 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
CLDND1-215ENST00000507874 CCKARP32238 428 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 PCYT1AP49585 367 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 GCNT6Q5T4J0 391 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 METTL21CQ5VZV1 264 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 CLIP4Q8N3C7 705 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 DNAJA3Q96EY1 480 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 CPPED1Q9BRF8 314 aaPredicted RBP13.47□□□□□ -0.25
CLDND1-215ENST00000507874 BCL2L10Q9HD36 194 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 RASSF1Q9NS23 344 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 NDUFAF1Q9Y375 327 aa13.47□□□□□ -0.25
CLDND1-215ENST00000507874 SH3D21A4FU49 640 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 SMAD9O15198 467 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 PGM3O95394 542 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 TFPIP10646 304 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 GPX2P18283 190 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 CCNA2P20248 432 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 TACR3P29371 465 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 ACAA2P42765 397 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 KCNJ5P48544 419 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 DIO1P49895 249 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 RUNDC3AQ59EK9 446 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 RNF220Q5VTB9 566 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 TMPPEQ6ZT21 453 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 TUSC5Q8IXB3 177 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 ZNF440Q8IYI8 595 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 NFKBIDQ8NI38 313 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 BBS10Q8TAM1 723 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 NRGNQ92686 78 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 ARL5BQ96KC2 179 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 DACH2Q96NX9 599 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 SPATA9Q9BWV2 254 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 C12orf49Q9H741 205 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 KLHL13Q9P2N7 655 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 OSGIN1Q9UJX0 560 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 IFT52Q9Y366 437 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.25
CLDND1-215ENST00000507874 NOTCH2Q04721 2471 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 CENPEQ02224 2701 aa13.46□□□□□ -0.25
CLDND1-215ENST00000507874 MPDZO75970 2070 aa13.46□□□□□ -0.26
CLDND1-215ENST00000507874 APCP25054 2843 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 TMEM72A0PK05 275 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 SULT2B1O00204 365 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 ANGPT2O15123 496 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 PRKD3O94806 890 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 PRG2P13727 222 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 UGT2B10P36537 528 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 HTR3AP46098 478 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 POLR2HP52434 150 aaKnown RBP13.45□□□□□ -0.26
CLDND1-215ENST00000507874 ARFIP2P53365 341 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 CDK6Q00534 326 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 EXOC3L2Q2M3D2 409 aa13.45□□□□□ -0.26
CLDND1-215ENST00000507874 ZNF311Q5JNZ3 666 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms