RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SLC43A2Q8N370 569 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ANKFN1Q8N957 763 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM234Q8WY98 164 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF75CPQ92670 426 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ARL8AQ96BM9 186 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 C7orf26Q96N11 449 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 OR52B2Q96RD2 323 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ZBTB18Q99592 522 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 CCDC106Q9BWC9 280 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 BCO1Q9HAY6 547 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 C6orf203Q9P0P8 240 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 KLHL13Q9P2N7 655 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 LIPT1Q9Y234 373 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF469Q96JG9 3925 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 DSPPQ9NZW4 1301 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 A0A1W2PNR3 127 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CLDN24A6NM45 220 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 SMAD9O15198 467 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KLF4O43474 513 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CYP7B1O75881 506 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 PRKD3O94806 890 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 GSNP06396 782 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 YES1P07947 543 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KLK2P20151 261 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC7A1P30825 629 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 APOBEC1P41238 236 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ANXA11P50995 505 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 MERTKQ12866 999 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KEAP1Q14145 624 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 EXOC3L2Q2M3D2 409 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 GPAT3Q53EU6 434 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 SYT14P1Q58G82 188 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ANKRD34AQ69YU3 496 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 NXNQ6DKJ4 435 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ABLIM2Q6H8Q1 611 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 EPGNQ6UW88 154 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF621Q6ZSS3 439 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 TMPPEQ6ZT21 453 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CXorf67Q86X51 503 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 TUSC5Q8IXB3 177 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CMIPQ8IY22 773 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ATP6V1C2Q8NEY4 427 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 OR9I1Q8NGQ6 314 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC25A43Q8WUT9 341 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CNOT9Q92600 299 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 PMM1Q92871 262 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 REXO5Q96IC2 774 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 HS3ST6Q96QI5 342 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 PSD2Q9BQI7 771 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 TACO1Q9BSH4 297 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KLHL4Q9C0H6 718 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 DLL4Q9NR61 685 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 CTPS2Q9NRF8 586 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 SERINC1Q9NRX5 453 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 BEX4Q9NWD9 120 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 KLHL9Q9P2J3 617 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 GPR52Q9Y2T5 361 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
PDLIM5-209ENST00000506632 IGHV3-15A0A0B4J1V0 119 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF814B7Z6K7 855 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 FAAHO00519 579 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 RFXANKO14593 260 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 UBDO15205 165 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 CYTIPO60759 359 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 TGDSO95455 350 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 KRT75O95678 551 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 CD99P14209 185 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 HOXB9P17482 250 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 HOXC12P31275 282 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 DIO1P49895 249 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 RIPPLY3P57055 190 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ADAM8P78325 824 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 HPCAP84074 193 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 GTDC1Q4AE62 458 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 TTMPQ5BVD1 217 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 BEX5Q5H9J7 111 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM201Q5SNT2 666 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 GRINAQ7Z429 371 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 HMGN2P46Q86SG4 172 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 STK32CQ86UX6 486 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ADGRG3Q86Y34 549 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ARFGAP2Q8N6H7 521 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 PNPT1Q8TCS8 783 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 IGFBPL1Q8WX77 278 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 PIK3IP1Q96FE7 263 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ZC3HAV1LQ96H79 300 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ATP6V1G3Q96LB4 118 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 OR5B2Q96R09 309 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 PIP5K1AQ99755 562 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ACTR6Q9GZN1 396 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 MTHFD2LQ9H903 347 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 SLCO1B3Q9NPD5 702 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 FANCFQ9NPI8 374 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 CHRNA9Q9UGM1 479 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 ARID1AO14497 2285 aa8.06□□□□□ -1.12
PDLIM5-209ENST00000506632 NF1P21359 2839 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms