RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 ATG4DQ86TL0 474 aaPredicted RBP12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 RNF130Q86XS8 419 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 ADGRG3Q86Y34 549 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 P3H2Q8IVL5 708 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 STEAP2Q8NFT2 490 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 RAB3IL1Q8TBN0 382 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF300Q96RE9 604 aaPredicted RBP12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 CCL19Q99731 98 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 CTPS2Q9NRF8 586 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC6A13Q9NSD5 602 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 HEATR5AQ86XA9 2040 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 NAV3Q8IVL0 2385 aa12.77□□□□□ -0.37
CDC42SE2-209ENST00000506419 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 HDAC3O15379 428 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 ARHGEF9O43307 516 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 PGRP06401 933 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 CHRM4P08173 479 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 INHBBP09529 407 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 NTF4P34130 210 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR3A2P47893 321 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 DIO1P49895 249 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 TAB1Q15750 504 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 KRTAP21-3Q3LHN1 58 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 GPAT3Q53EU6 434 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 SEZ6L2Q6UXD5 910 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF621Q6ZSS3 439 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 MAVSQ7Z434 540 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 CROCCP2Q86T23 111 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 KIRREL3Q8IZU9 778 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 PERPQ96FX8 193 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 ARL5BQ96KC2 179 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR52E6Q96RD3 313 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC38A1Q9H2H9 487 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 FANCFQ9NPI8 374 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 SERINC1Q9NRX5 453 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC35A3Q9Y2D2 325 aa12.76□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 AP3D1O14617 1153 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 FESP07332 822 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 APOBEC1P41238 236 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 IDH2P48735 452 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 KHKP50053 298 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 MVDP53602 400 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC18A1P54219 525 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 ITGADQ13349 1161 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 P2RY6Q15077 328 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC9B1Q4ZJI4 515 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 SYT14P1Q58G82 188 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 C3orf33Q6P1S2 294 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 BIVMQ86UB2 503 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 MTDHQ86UE4 582 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 OIT3Q8WWZ8 545 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMEM234Q8WY98 164 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 HSD17B8Q92506 261 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 AKAP1Q92667 903 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 ARL8AQ96BM9 186 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 TLCD1Q96CP7 247 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 MAELQ96JY0 434 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 Q96MF0 132 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRNT1Q96Q11 434 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 MTHFD2LQ9H903 347 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 KLHL9Q9P2J3 617 aa12.75□□□□□ -0.37
CDC42SE2-209ENST00000506419 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZANQ9Y493 2812 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 AGAP5A6NIR3 686 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 SULT2B1O00204 365 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 HS3ST1O14792 307 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 RAMP1O60894 148 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 TFPIP10646 304 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 PAX1P15863 534 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 CCNA2P20248 432 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 PTH2RP49190 550 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 NR1H2P55055 460 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 LTBQ06643 244 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 Q6ZT83 130 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 CCDC103Q8IW40 242 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 ARFGAP2Q8N6H7 521 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF563Q8TA94 476 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 PNPT1Q8TCS8 783 aaKnown RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 KISS1RQ969F8 398 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR52B2Q96RD2 323 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms