RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KLHL24Q6TFL4 600 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 VASH1Q7L8A9 365 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 MTERF4Q7Z6M4 381 aaKnown RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 C3orf56Q8N813 242 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 OR5W2Q8NH69 310 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 GPR119Q8TDV5 335 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ANP32BQ92688 251 aaKnown RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ARL8AQ96BM9 186 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ZHX1-C8orf76Q96EF9 292 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 SNX18Q96RF0 628 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 KCNS3Q9BQ31 491 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 OCSTAMPQ9BR26 566 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 BHLHE41Q9C0J9 482 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 KCNF1Q9H3M0 494 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 CDC42EP4Q9H3Q1 356 aaKnown RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 REEP4Q9H6H4 257 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 METTL17Q9H7H0 456 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 GRPEL1Q9HAV7 217 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 RRAGDQ9NQL2 400 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 UPB1Q9UBR1 384 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 TMEFF2Q9UIK5 374 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 FIS1Q9Y3D6 152 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 DYSFO75923 2080 aa6.03□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF264O43296 627 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 MRPL33O75394 65 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 HSPA4LO95757 839 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 HMGN2P05204 90 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 GSTA1P08263 222 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 UBTFL6P0CB48 400 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CREB1P16220 341 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 EGR1P18146 543 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SDC1P18827 310 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CCNA2P20248 432 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 IMPDH1P20839 514 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SERPINF1P36955 418 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CHN2P52757 468 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 RPL38P63173 70 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CSNK2A1P68400 391 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 TP53BP2Q13625 1128 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CBFBQ13951 182 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 TRIP10Q15642 601 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SYT14P1Q58G82 188 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 DCST2Q5T1A1 773 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 PDZK1Q5T2W1 519 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 OR7E24Q6IFN5 339 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SHQ1Q6PI26 577 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 TMPPEQ6ZT21 453 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SLC22A9Q8IVM8 553 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 LINC01356Q8N9X3 169 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 WDR31Q8NA23 367 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 ZNF540Q8NDQ6 660 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 FAM76AQ8TAV0 307 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 ADAMTS15Q8TE58 950 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 DCAKDQ8WVC6 231 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 GCDHQ92947 438 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 ZMYND19Q96E35 227 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 FAM120BQ96EK7 910 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 L3HYPDHQ96EM0 354 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 MUS81Q96NY9 551 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 STACQ99469 402 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 CCT7Q99832 543 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 THUMPD3Q9BV44 507 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 PIGUQ9H490 435 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 GSTO2Q9H4Y5 243 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 LPAR2Q9HBW0 351 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 TNFRSF12AQ9NP84 129 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 MYOZ1Q9NP98 299 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SLC17A5Q9NRA2 495 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SERINC1Q9NRX5 453 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 SIRT3Q9NTG7 399 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 ZDHHC18Q9NUE0 388 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 MALT1Q9UDY8 824 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 BAIAP2L1Q9UHR4 511 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 FAF1Q9UNN5 650 aaPredicted RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 WBP11Q9Y2W2 641 aaKnown RBP6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 AMDHD2Q9Y303 409 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 DTNAQ9Y4J8 743 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 KCNE3Q9Y6H6 103 aa6.02□□□□□ -1.45
NPIPB3-203ENST00000504841 ARFGEF3Q5TH69 2177 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 HEATR1Q9H583 2144 aaKnown RBP6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 IGKV3D-15A0A087WSY6 115 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 CENPVL1A0A0U1RR11 272 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SERTM1A2A2V5 107 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SERINC4A6NH21 518 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 ZNF716A6NP11 495 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 GPR171O14626 319 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 EIF4E2O60573 245 aaKnown RBP6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SNUPNO95149 360 aaKnown RBP6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 STAMBPO95630 424 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 CSTAP01040 98 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SNRPAP09012 282 aaKnown RBP6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 OR4A8P0C604 315 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 DAOP14920 347 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 NTF4P34130 210 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SOAT1P35610 550 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 ATP12AP54707 1039 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 CDH15P55291 814 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 SESN3P58005 492 aa6.01□□□□□ -1.45
NPIPB3-203ENST00000504841 OR2B6P58173 313 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms