RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TRBV4-1A0A0J9YWV2 114 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 TNFSF8P32971 234 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 ARL3P36405 182 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 OPRD1P41143 372 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 ALDH3B2P48448 385 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 SBSNQ6UWP8 590 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 SHISA6Q6ZSJ9 500 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 Q6ZSR9 355 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 FAM83FQ8NEG4 500 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 ARRDC3Q96B67 414 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 MYH15Q9Y2K3 1946 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 ANKRD30BLA7E2S9 258 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 GASTP01350 101 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 IGHG1P01857 330 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 FURINP09958 794 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 RAB40ALP0C0E4 278 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 OR4F15Q8NGB8 312 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 RAB40AQ8WXH6 277 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 PCDHGA6Q9Y5G7 932 aa15.44■□□□□ 0.06
PCDHA1-203ENST00000504120 TRBV11-1A0A0K0K1C0 115 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 C7orf72A4D263 438 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 FOSL2P15408 326 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 REEP5Q00765 189 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 SPCS2Q15005 226 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TRAPPC6BQ86SZ2 158 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 OR14A16Q8NHC5 309 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 SLC6A20Q9NP91 592 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 MARCH5Q9NX47 278 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 PGAP2Q9UHJ9 254 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 RHBDD3Q9Y3P4 386 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 LSM5Q9Y4Y9 91 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 ADARB1P78563 741 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 CAMK2DQ13557 499 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TMEM201Q5SNT2 666 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 OPN5Q6U736 354 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 SERPINA12Q8IW75 414 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 PARP16Q8N5Y8 322 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 ARL11Q969Q4 196 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 HINT2Q9BX68 163 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 HDAC8Q9BY41 377 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 PRSS16Q9NQE7 514 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 METTL15A6NJ78 407 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TSPAN15O95858 294 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 DLSTP36957 453 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 PXNP49023 591 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 DAPP51397 102 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 MGAT3Q09327 533 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TMEM102Q8N9M5 508 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 EGLN3Q9H6Z9 239 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TMEM269A0A1B0GVZ9 245 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 CDHR4A6H8M9 788 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 POU3F2P20265 443 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 MAOAP21397 527 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 GCH1P30793 250 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 RPS5P46782 204 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 CAV2P51636 162 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 SMN1Q16637 294 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 TECPR1Q7Z6L1 1165 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 SGCZQ96LD1 299 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 ZNF281Q9Y2X9 895 aa15.43■□□□□ 0.06
PCDHA1-203ENST00000504120 A0A1W2PQ09 198 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 HIDE1A8MVS5 230 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 GABRPO00591 440 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 ZNF264O43296 627 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 PPP1R3BQ86XI6 285 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 RHOXF1Q8NHV9 184 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MS4A8Q9BY19 250 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 CXXC1Q9P0U4 656 aaPredicted RBP15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 LOC102723532A0A0G2JNH3 316 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MEIOCA2RUB1 952 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 GFRA2O00451 464 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 ACTL6BO94805 426 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 SERPINE2P07093 398 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 GAAP10253 952 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MMP12P39900 470 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 SIMC1Q8NDZ2 872 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MYLIPQ8WY64 445 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 S100PBPQ96BU1 408 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 GAPDHSO14556 408 aaPredicted RBP15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 KLKB1P03952 638 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 GABRA5P31644 462 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 LEXMQ3ZCV2 418 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 C19orf47Q8N9M1 422 aaKnown RBP15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MZB1Q8WU39 189 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 PCBD1P61457 104 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 EEF1A1P68104 462 aaKnown RBP15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 FGL2Q14314 439 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 C3orf38Q5JPI3 329 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 ELP2Q6IA86 826 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 TSSK4Q6SA08 328 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 C5orf46Q6UWT4 87 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 OR51Q1Q8NH59 317 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 KCTD12Q96CX2 325 aaKnown RBP15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 TXNDC15Q96J42 360 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 HCAR1Q9BXC0 346 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 MFFQ9GZY8 342 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 ELOVL3Q9HB03 270 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 EMC3Q9P0I2 261 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 ACAD8Q9UKU7 415 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms