RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PGM1P36871 562 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CDKN1AP38936 164 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 MAGEA8P43361 318 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CLDN8P56748 225 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 SESN3P58005 492 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 HBA1P69905 142 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 QPRTQ15274 297 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 TOMM34Q15785 309 aaPredicted RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 GABRA6Q16445 453 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 DPY19L1Q2PZI1 675 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM249Q2WGJ8 235 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 C3orf36Q3SXR2 165 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 C6orf136Q5SQH8 315 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CCNJQ5T5M9 372 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ANKRD26P1Q6NSI1 321 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 PPP4R4Q6NUP7 873 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CLEC2AQ6UVW9 174 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 EIF3MQ7L2H7 374 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 SZRD1Q7Z422 152 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 GRINAQ7Z429 371 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 C10orf107Q8IVU9 208 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CMIPQ8IY22 773 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 DEPDC4Q8N2C3 294 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 MUC15Q8N387 334 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 GATSQ8NAP1 163 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 PIGXQ8TBF5 258 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM45BQ96B21 275 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 APH1AQ96BI3 265 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ZHX1-C8orf76Q96EF9 292 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 APOPT1Q96IL0 206 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 C16orf45Q96MC5 204 aaPredicted RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 OR7D2Q96RA2 312 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 KLHDC3Q9BQ90 382 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 INPP5KQ9BT40 448 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 THUMPD3Q9BV44 507 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 DUSP26Q9BV47 211 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CCDC106Q9BWC9 280 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 REPIN1Q9BWE0 567 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 SF3B5Q9BWJ5 86 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ANKZF1Q9H8Y5 726 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 OBP2BQ9NPH6 170 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 EXD2Q9NVH0 621 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ASB6Q9NWX5 421 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 NPAP1Q9NZP6 1156 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CHRNA9Q9UGM1 479 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 BAIAP2L1Q9UHR4 511 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 PRSS50Q9UI38 385 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 PCDHGB4Q9UN71 923 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 AMDHD2Q9Y303 409 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 A0A1W2PNR3 127 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 RNF212BA8MTL3 300 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 E7EQL1 145 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 SULT2B1O00204 365 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PIP5K1BO14986 540 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 OIP5O43482 229 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 GMFGO60234 142 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 KIAA0513O60268 411 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 RAMP1O60894 148 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 SCN2BO60939 215 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 LYZL6O75951 148 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PDE5AO76074 875 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 H6PDO95479 791 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 C6orf47O95873 294 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 OPN1LWP04000 364 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM153BP0C7A2 387 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 MATN1P21941 496 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 CD40P25942 277 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 APOBEC3AP31941 199 aaPredicted RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 EFNA4P52798 201 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 NUDT6P53370 316 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 CDH11P55287 796 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 IRX1P78414 480 aaPredicted RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 TGFBR3Q03167 851 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 EMX2Q04743 252 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 CHRNB3Q05901 458 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 LRRC74AQ0VAA2 488 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PTGR1Q14914 329 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 RAB35Q15286 201 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 ZSWIM7Q19AV6 140 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 SWI5Q1ZZU3 235 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM153CQ494X1 144 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 GALNTL6Q49A17 601 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PDZK1Q5T2W1 519 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 TYW3Q6IPR3 259 aaKnown RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 C6orf120Q7Z4R8 191 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PHC2Q8IXK0 858 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF100Q8IYN0 542 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FBXL14Q8N1E6 418 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 C17orf53Q8N3J3 647 aaPredicted RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM169BQ8N8A8 192 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 CCDC63Q8NA47 563 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 ANKK1Q8NFD2 765 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 OR7A2PQ8NGA2 310 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 KIF18AQ8NI77 898 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FBXO30Q8TB52 745 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 C10orf105Q8TEF2 133 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 NANOS1Q8WY41 292 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms