RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 GPR171O14626 319 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 SEC22BO75396 215 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 RSL1D1O76021 490 aaKnown RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 STAMBPO95630 424 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 HMGN2P05204 90 aaKnown RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 GSTA1P08263 222 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 DAOP14920 347 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 ATP5F1P24539 256 aaPredicted RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 CDH15P55291 814 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 PRPS1P60891 318 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 LGALS3BPQ08380 585 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 MST1LQ2TV78 715 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 KLHL26Q53HC5 615 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 ZNF385BQ569K4 471 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 DCST2Q5T1A1 773 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDK9-205ENST00000498339 THSD4Q6ZMP0 1018 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 TMPPEQ6ZT21 453 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 MTDHQ86UE4 582 aaKnown RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 GLCCI1Q86VQ1 547 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 SLC22A9Q8IVM8 553 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 CCNYL1Q8N7R7 359 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 WDR31Q8NA23 367 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 CLHC1Q8NHS4 586 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 PIGXQ8TBF5 258 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 SLC25A43Q8WUT9 341 aaPredicted RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 HPS1Q92902 700 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 TSSK3Q96PN8 268 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 STACQ99469 402 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 REEP4Q9H6H4 257 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 DUSP22Q9NRW4 184 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 CA10Q9NS85 328 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
CDK9-205ENST00000498339 SPIN1Q9Y657 262 aaPredicted RBP10.18□□□□□ -0.78
CDK9-205ENST00000498339 SERTM1A2A2V5 107 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 ZNF716A6NP11 495 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 B9A039 149 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 TRIM77I1YAP6 450 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 KLF11O14901 512 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 SKAP2O75563 359 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 IFNGR1P15260 489 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 IMPDH1P20839 514 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 SLC1A3P43003 542 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 MAGEA8P43361 318 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 COMPP49747 757 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 PPOXP50336 477 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 IDH3GP51553 393 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 ATP12AP54707 1039 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 DVL1P1P54792 670 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 TP53BP2Q13625 1128 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 PDK3Q15120 406 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 SPDYE7PQ495Y7 208 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 SLC25A53Q5H9E4 307 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 UGT2A3Q6UWM9 527 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 TMEM151AQ8N4L1 468 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 ADAMTS15Q8TE58 950 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 TMEM234Q8WY98 164 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 ZNF524Q96C55 264 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 FAM120BQ96EK7 910 aaKnown RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 THUMPD3Q9BV44 507 aaKnown RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 PIGUQ9H490 435 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 DYNLRB1Q9NP97 96 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 TMEM216Q9P0N5 145 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 FAF1Q9UNN5 650 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 DTNAQ9Y4J8 743 aa10.17□□□□□ -0.78
CDK9-205ENST00000498339 NUP214P35658 2090 aaPredicted RBP10.17□□□□□ -0.78
CDK9-205ENST00000498339 TRRAPQ9Y4A5 3859 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 EIF4E2O60573 245 aaKnown RBP10.16□□□□□ -0.78
CDK9-205ENST00000498339 CRYAAP02489 173 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 TACSTD2P09758 323 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 OR4A8P0C604 315 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 DDX5P17844 614 aaKnown RBP10.16□□□□□ -0.78
CDK9-205ENST00000498339 PRKAA2P54646 552 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 SESN3P58005 492 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 OR2B6P58173 313 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 TRIP10Q15642 601 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 PDZK1Q5T2W1 519 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
CDK9-205ENST00000498339 CCDC103Q8IW40 242 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 ZNF563Q8TA94 476 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 WDR60Q8WVS4 1066 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 ST8SIA1Q92185 356 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 L3HYPDHQ96EM0 354 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 RBM4Q9BWF3 364 aaKnown RBP10.16□□□□□ -0.78
CDK9-205ENST00000498339 SAP130Q9H0E3 1048 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 GSTO2Q9H4Y5 243 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 NARFLQ9H6Q4 476 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 LPAR2Q9HBW0 351 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 SLC7A10Q9NS82 523 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 ACSS1Q9NUB1 689 aaPredicted RBP10.16□□□□□ -0.78
CDK9-205ENST00000498339 PCDHB10Q9UN67 800 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 SLC9A8Q9Y2E8 581 aa10.16□□□□□ -0.78
CDK9-205ENST00000498339 IGHV1-18A0A0C4DH31 117 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms