RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SLC2A1P11166 492 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 MUC1P15941 1255 aaPredicted RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 RCC1P18754 421 aaPredicted RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 CERS1P27544 350 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 DGKEP52429 567 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 NRG3P56975 720 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 SEMG2Q02383 582 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 SSX2Q16385 188 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 UBE2NLQ5JXB2 153 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 AADACL4Q5VUY2 407 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 UBE2R2Q712K3 238 aaPredicted RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 KLBQ86Z14 1044 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 MRPL38Q96DV4 380 aaKnown RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 SUSD3Q96L08 255 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 WRAP53Q9BUR4 548 aaKnown RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 TWSG1Q9GZX9 223 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 MRPL17Q9NRX2 175 aaKnown RBP8.43□□□□□ -1.06
HPS4-217ENST00000496385 TMEM30AQ9NV96 361 aa8.43□□□□□ -1.06
HPS4-217ENST00000496385 DRGXA6NNA5 263 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 FAM227AF5H4B4 570 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 OAZ2O95190 189 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 IL3P08700 152 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 RNF224P0DH78 156 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 CTSAP10619 480 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 ZNF44P15621 663 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 HTR1FP30939 366 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TRHRP34981 398 aaPredicted RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 OR1D2P34982 312 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 HTR5AP47898 357 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 RAB5CP51148 216 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 SIM1P81133 766 aaPredicted RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 CTXN3Q4LDR2 81 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 CXorf57Q6NSI4 855 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 IL34Q6ZMJ4 242 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 GAREM2Q75VX8 874 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 OR2W3Q7Z3T1 314 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 MRPL43Q8N983 215 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 ARL11Q969Q4 196 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 PEX11GQ96HA9 241 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 XKR8Q9H6D3 395 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 REEP4Q9H6H4 257 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TUBA4BQ9H853 241 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 INPP5EQ9NRR6 644 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 A0A1B0GVC2 190 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 FAM86C2PA6NEL3 165 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 MGAT4DA6NG13 374 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 A6NIN4 97 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 ZNF879B4DU55 563 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TMEM189-UBE2V1I3L0A0 370 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 BCL2L11O43521 198 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 SLC34A2O95436 690 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 EFEMP2O95967 443 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 EPHX1P07099 455 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 MMP11P24347 488 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 MAT2AP31153 395 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 FAUP35544 74 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 IFNGR2P38484 337 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 SLC6A12P48065 614 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 RPIAP49247 311 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 H2BFSP57053 126 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 RNF4P78317 190 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 RAB33AQ14088 237 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 INSL4Q14641 139 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TOMM20Q15388 145 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TSSK4Q6SA08 328 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 APOOLQ6UXV4 268 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 NHLRC1Q6VVB1 395 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 SLC36A1Q7Z2H8 476 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 CELF5Q8N6W0 485 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 BRIX1Q8TDN6 353 aaKnown RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 FCAMRQ8WWV6 532 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 SEPT5Q99719 369 aaPredicted RBP8.42□□□□□ -1.06
HPS4-217ENST00000496385 MRI1Q9BV20 369 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 TLNRD1Q9H1K6 362 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 PDFQ9HBH1 243 aa8.42□□□□□ -1.06
HPS4-217ENST00000496385 E9PI62 339 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 GPR37L1O60883 481 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 ICOSLGO75144 302 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 UBXN7O94888 489 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 SLC25A14O95258 325 aaPredicted RBP8.41□□□□□ -1.06
HPS4-217ENST00000496385 SLC25A4P12235 298 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 ZNF35P13682 527 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 EPCAMP16422 314 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 XPAP23025 273 aaPredicted RBP8.41□□□□□ -1.06
HPS4-217ENST00000496385 BDKRB2P30411 391 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 SLC6A11P48066 632 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 RBP2P50120 134 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 HBA1P69905 142 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 ZXDBP98169 803 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 DLX2Q07687 328 aaPredicted RBP8.41□□□□□ -1.06
HPS4-217ENST00000496385 FAM180BQ6P0A1 224 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 REC114Q7Z4M0 266 aa8.41□□□□□ -1.06
HPS4-217ENST00000496385 ZNF546Q86UE3 836 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms