RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 RABGAP1LQ5R372 815 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 LIPNQ5VXI9 398 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 TMEM17Q86X19 198 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 VRK2Q86Y07 508 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 GRAMD2AQ8IUY3 354 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 FAM71E2Q8N5Q1 922 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 C20orf203Q8NBC4 194 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 ZNF740Q8NDX6 193 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 UCN3Q969E3 161 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 MYDGFQ969H8 173 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 SYAP1Q96A49 352 aaPredicted RBP3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 DUSP16Q9BY84 665 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 LIN28AQ9H9Z2 209 aaKnown RBP3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 EPS15L1Q9UBC2 864 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 ZNF225Q9UK10 706 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 ZNF223Q9UK11 482 aaPredicted RBP3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 WSB1Q9Y6I7 421 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 FRMPD3Q5JV73 1810 aa3.25□□□□□ -1.89
NCKAP1-208ENST00000495619 PP2D1A8MPX8 630 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 FAM25EA8MYX2 175 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 SMPD2O60906 423 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 LALBAP00709 142 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 INSP01308 110 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 RNH1P13489 461 aaKnown RBP3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 DESP17661 470 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 NT5EP21589 574 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 CCNCP24863 283 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 PRPHP41219 470 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 UNQ9370/PRO34162Q6UXP9 181 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 SYT10Q6XYQ8 523 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 FAM220AQ7Z4H9 259 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 NEIL3Q8TAT5 605 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 C16orf45Q96MC5 204 aaPredicted RBP3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 MAGT1Q9H0U3 335 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 YY1AP1Q9H869 796 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 PLGRKTQ9HBL7 147 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 B3GNT2Q9NY97 397 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 HOXC10Q9NYD6 342 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 SUN2Q9UH99 717 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 ANGPTL2Q9UKU9 493 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 OARD1Q9Y530 152 aa3.24□□□□□ -1.89
NCKAP1-208ENST00000495619 A0A1B0GWB2 263 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 A6NDX4 124 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 ZNF705EA8MWA4 302 aaPredicted RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 SNAI2O43623 268 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 ECI2O75521 394 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 KIAA0754O94854 1291 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 F10P00742 488 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 KRT8P05787 483 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 NEFHP12036 1026 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 TBXA2RP21731 343 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 COX7A1P24310 79 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 SUCLG1P53597 346 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 PFN3P60673 137 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 CSNK1G2P78368 415 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 RAB40BQ12829 278 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 MRPL28Q13084 256 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 MAPK6Q16659 721 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 NCR3LG1Q68D85 454 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 GALNT17Q6IS24 598 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 Q8N9W7 124 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 MNS1Q8NEH6 495 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 OR52I1Q8NGK6 324 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 MARCH1Q8TCQ1 289 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 GIMAP1Q8WWP7 306 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 PIGCQ92535 297 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 CELF6Q96J87 481 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 C4orf36Q96KX1 117 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 MCHR1Q99705 422 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 SLC6A7Q99884 636 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 THUMPD2Q9BTF0 503 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 ZNF416Q9BWM5 594 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 GSDMCQ9BYG8 508 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 DPH5Q9H2P9 285 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 VCXQ9H320 206 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 NXF3Q9H4D5 531 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 CGNQ9P2M7 1197 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 NUFIP1Q9UHK0 495 aaKnown RBP3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 BLOC1S6Q9UL45 172 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 KIF3AQ9Y496 699 aa3.23□□□□□ -1.89
NCKAP1-208ENST00000495619 SF3B1O75533 1304 aaKnown RBP eCLIP3.22□□□□□ -1.894e-9■■■■■ 60.3
NCKAP1-208ENST00000495619 FRMPD4Q14CM0 1322 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 TTC21BQ7Z4L5 1316 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 A0A1W2PNV4 684 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 GSAPA4D1B5 854 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 PSMB11A5LHX3 300 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 NKX2-6A6NCS4 301 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 H3BMQ9 156 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 BOLA2-SMG1P6H3BVE0 249 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 FCN1O00602 326 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 MAPK13O15264 365 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 OR1F1O43749 312 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 UGT2B17O75795 530 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 IFNB1P01574 187 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 PGCP20142 388 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 CALB2P22676 271 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 PAX7P23759 505 aa3.22□□□□□ -1.89
NCKAP1-208ENST00000495619 CD80P33681 288 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms