RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
SCAP-213ENST00000494938 PACSIN3Q9UKS6 424 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 MCTS1Q9ULC4 181 aaKnown RBP12.85□□□□□ -0.35
SCAP-213ENST00000494938 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 IFT52Q9Y366 437 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 PKDREJQ9NTG1 2253 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 PDZD2O15018 2839 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 TMEM247A6NEH6 219 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 ANGPT2O15123 496 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
SCAP-213ENST00000494938 FCGR2AP12318 317 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 PRG2P13727 222 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 ETS2P15036 469 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 ENPP1P22413 925 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 SSTR2P30874 369 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 SLC1A3P43003 542 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 RAC3P60763 192 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 SIRPAP78324 504 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 CDK6Q00534 326 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 LARS2Q15031 903 aaKnown RBP12.84□□□□□ -0.35
SCAP-213ENST00000494938 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
SCAP-213ENST00000494938 ZSWIM7Q19AV6 140 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 RNF220Q5VTB9 566 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 REEP3Q6NUK4 255 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 TMPPEQ6ZT21 453 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 GDF7Q7Z4P5 450 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 DHDDSQ86SQ9 333 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 ZNF440Q8IYI8 595 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 ZNF610Q8N9Z0 462 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 GMPPAQ96IJ6 420 aaPredicted RBP12.84□□□□□ -0.35
SCAP-213ENST00000494938 OPN3Q9H1Y3 402 aaPredicted RBP12.84□□□□□ -0.35
SCAP-213ENST00000494938 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 OSGIN1Q9UJX0 560 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
SCAP-213ENST00000494938 CACNA1CQ13936 2221 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 C5orf58C9J3I9 102 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 GCM2O75603 506 aaPredicted RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 PABPC4LP0CB38 370 aaKnown RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 CD8BP10966 210 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 KLK2P20151 261 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 GZMMP51124 257 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 TLE4Q04727 773 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 FAM27E3Q08E93 113 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 NFYCQ13952 458 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 CAPRIN1Q14444 709 aaKnown RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 ZNF311Q5JNZ3 666 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 PPP4R4Q6NUP7 873 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 C3orf33Q6P1S2 294 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 COMTD1Q86VU5 262 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 LINC01560Q8TB33 94 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 RNF128Q8TEB7 428 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 LRRC46Q96FV0 321 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 OR5B2Q96R09 309 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 KAT8Q9H7Z6 458 aaKnown RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 SLC24A3Q9HC58 644 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 MCCC2Q9HCC0 563 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 GALNT8Q9NY28 637 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 ING1Q9UK53 422 aaPredicted RBP12.83□□□□□ -0.36
SCAP-213ENST00000494938 CORO2BQ9UQ03 480 aa12.83□□□□□ -0.36
SCAP-213ENST00000494938 TMED7-TICAM2A0A0A6YYA0 188 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 IGHV3-15A0A0B4J1V0 119 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 LOC100653049A0A140TA62 436 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 TPST1O60507 370 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 SMNDC1O75940 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCAP-213ENST00000494938 KRT34O76011 436 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 CCNA2P20248 432 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 SLC6A2P23975 617 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 FKBP2P26885 142 aaKnown RBP12.82□□□□□ -0.36
SCAP-213ENST00000494938 TACR3P29371 465 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 ADSLP30566 484 aaPredicted RBP12.82□□□□□ -0.36
SCAP-213ENST00000494938 SLC7A1P30825 629 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 PEX19P40855 299 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 HTR3AP46098 478 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 PCYT1AP49585 367 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 CLK1P49759 484 aaKnown RBP12.82□□□□□ -0.36
SCAP-213ENST00000494938 POLR2HP52434 150 aaKnown RBP12.82□□□□□ -0.36
SCAP-213ENST00000494938 SEC24CP53992 1094 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 MTPNP58546 118 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 SORDQ00796 357 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 SCARB2Q14108 478 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 SYT14P1Q58G82 188 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 GTF2IRD2BQ6EKJ0 949 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 NANOGP8Q6NSW7 305 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 FCRLAQ7L513 359 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 ZNF550Q7Z398 422 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
SCAP-213ENST00000494938 SERPINA11Q86U17 422 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 GTF2IRD2Q86UP8 949 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 KIF18BQ86Y91 864 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 ZZZ3Q8IYH5 903 aa12.82□□□□□ -0.36
SCAP-213ENST00000494938 FAM222BQ8WU58 562 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms