RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CENPHQ9H3R5 247 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 MEAF6Q9HAF1 191 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 SLC6A13Q9NSD5 602 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 GPR52Q9Y2T5 361 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 PRSS51A0A1B0GVH4 220 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 GJE1A6NN92 205 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF716A6NP11 495 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 E9PBE3 544 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CYTIPO60759 359 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 AK1P00568 194 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 YES1P07947 543 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CHRM4P08173 479 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 SOD3P08294 240 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 PABPC4LP0CB38 370 aaKnown RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 UQCRC2P22695 453 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 OR3A2P47893 321 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 DIO1P49895 249 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CHRNEQ04844 493 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 MERTKQ12866 999 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 MAPK11Q15759 364 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 SYPL1Q16563 259 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 SYT14P1Q58G82 188 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 COX20Q5RI15 118 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 OGFOD2Q6N063 350 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 MAVSQ7Z434 540 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 RNF130Q86XS8 419 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 PNPT1Q8TCS8 783 aaKnown RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CNOT9Q92600 299 aaKnown RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 KISS1RQ969F8 398 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 REXO5Q96IC2 774 aaKnown RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CCDC115Q96NT0 180 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 SAP130Q9H0E3 1048 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 OR10A4Q9H209 315 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 SLC38A1Q9H2H9 487 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 WDR55Q9H6Y2 383 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 TIGARQ9NQ88 270 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 CTPS2Q9NRF8 586 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 ACER3Q9NUN7 267 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 AIG1Q9NVV5 245 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 NPAP1Q9NZP6 1156 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 MARCOQ9UEW3 520 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-208ENST00000494728 WDR45Q9Y484 360 aa10.31□□□□□ -0.76
VTI1A-208ENST00000494728 YLPM1P49750 1951 aaKnown RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 CHD3Q12873 2000 aaKnown RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 GOLGA8QA0A0J9YX86 632 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 GOLGA8OA6NCC3 632 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 DUXAA6NLW8 204 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 GOLGA8NF8WBI6 632 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ARHGEF9O43307 516 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 IGHV3-9P01782 118 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 GSNP06396 782 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 PAX1P15863 534 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 LBPP18428 481 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 COX5AP20674 150 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 IGHV1-2P23083 117 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 IL32P24001 234 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 EPHA3P29320 983 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 RYKP34925 604 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 KHKP50053 298 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 NR1H2P55055 460 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 FOXG1P55316 489 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 KRTAP1-1Q07627 177 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 RASGEF1BQ0VAM2 473 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 STX3Q13277 289 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 NCMAPQ5T1S8 102 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ADAM5Q6NVV9 412 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 PRSS57Q6UWY2 283 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 DNAJC14Q6Y2X3 702 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 Q6ZT83 130 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 EIF3MQ7L2H7 374 aaKnown RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF611Q8N823 705 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ANKRD42Q8N9B4 389 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 STEAP2Q8NFT2 490 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 KCNK9Q9NPC2 374 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF701Q9NV72 531 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 EXD2Q9NVH0 621 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 KLHL9Q9P2J3 617 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 MAGED1Q9Y5V3 778 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-208ENST00000494728 GPR45Q9Y5Y3 372 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 ARFGEF3Q5TH69 2177 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 FBN3Q75N90 2809 aa10.3□□□□□ -0.76
VTI1A-208ENST00000494728 TMEM120BA0PK00 339 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 DPRXA6NFQ7 191 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 CLOCKO15516 846 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF500O60304 480 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 SNNO75324 88 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 SOX30O94993 753 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 CNOT4O95628 575 aaKnown RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 GUSBP08236 651 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 DANCRP0C864 163 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 PGCP20142 388 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 S100A3P33764 101 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 MVDP53602 400 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 SPOCK1Q08629 439 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms