RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SPATA19	Q7Z5L4	167 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	TMCO5A	Q8N6Q1	288 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	OR52E4	Q8NGH9	312 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ZNF524	Q96C55	264 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SNX18	Q96RF0	628 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	NAPG	Q99747	312 aa	Predicted RBP	16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	RAB17	Q9H0T7	212 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PIGU	Q9H490	435 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PARPBP	Q9NWS1	579 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	DTNA	Q9Y4J8	743 aa		16.79	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ZNF716	A6NP11	495 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ZNF264	O43296	627 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	NTF4	P34130	210 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PPOX	P50336	477 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	CCR4	P51679	360 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	NDUFAF6	Q330K2	333 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	EXOSC6	Q5RKV6	272 aa	Known RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PRR31	Q5SQ13	230 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	C9orf135	Q5VTT2	229 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ANKRD26P1	Q6NSI1	321 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	KLHL24	Q6TFL4	600 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	TRIM46	Q7Z4K8	759 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PIGX	Q8TBF5	258 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	NEU4	Q8WWR8	484 aa	Predicted RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	CDS1	Q92903	461 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PPCDC	Q96CD2	204 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ZNF764	Q96H86	408 aa	Predicted RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	TMEM237	Q96Q45	408 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	RBM4	Q9BWF3	364 aa	Known RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SAP130	Q9H0E3	1048 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	QRSL1	Q9H0R6	528 aa	Known RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	RRAGD	Q9NQL2	400 aa	Predicted RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	CA10	Q9NS85	328 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ACSS1	Q9NUB1	689 aa	Predicted RBP	16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SH3BP4	Q9P0V3	963 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PCDHB10	Q9UN67	800 aa		16.78	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334		B4DSR2	109 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PDLIM1	O00151	329 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SEC22B	O75396	215 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	RSL1D1	O76021	490 aa	Known RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PDE5A	O76074	875 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SLU7	O95391	586 aa	Known RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	OR4A8	P0C604	315 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	TFPI	P10646	304 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	FRK	P42685	505 aa	Predicted RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SLC16A1	P53985	500 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SYT14P1	Q58G82	188 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	CDC73	Q6P1J9	531 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PEG10	Q86TG7	708 aa	Known RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	GLCCI1	Q86VQ1	547 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SLC22A9	Q8IVM8	553 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ZNF614	Q8N883	585 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SPATA4	Q8NEY3	305 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	SLC25A43	Q8WUT9	341 aa	Predicted RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	TMEM234	Q8WY98	164 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	ST8SIA1	Q92185	356 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	METTL2A	Q96IZ6	378 aa	Known RBP	16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	PLK3	Q9H4B4	646 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	MID1IP1	Q9NPA3	183 aa		16.77	■□□□□ 0.28
CDK5RAP2-218	ENST00000491334	VSTM5	A8MXK1	200 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ESPN	B1AK53	854 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TBX19	O60806	448 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CRYAA	P02489	173 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	HMGN2	P05204	90 aa	Known RBP	16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	UBL4A	P11441	157 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PGC	P20142	388 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ATP5F1	P24539	256 aa	Predicted RBP	16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	MAGEA8	P43361	318 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PRKAA2	P54646	552 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SESN3	P58005	492 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SLC25A3	Q00325	362 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	MERTK	Q12866	999 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	EFNB3	Q15768	340 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ADIPOQ	Q15848	244 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	USP43	Q70EL4	1123 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZNF786	Q8N393	782 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	JMJD8	Q96S16	334 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	THUMPD3	Q9BV44	507 aa	Known RBP	16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	REEP4	Q9H6H4	257 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZNF696	Q9H7X3	374 aa		16.76	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TRIM49D1	C9J1S8	452 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DNPH1	O43598	174 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	IFNGR1	P15260	489 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DDX5	P17844	614 aa	Known RBP	16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PAX7	P23759	505 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	LIMS1	P48059	325 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	FOXA1	P55317	472 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DEFA6	Q01524	100 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	LASP1	Q14847	261 aa	Known RBP	16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DCST2	Q5T1A1	773 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SHQ1	Q6PI26	577 aa	Known RBP	16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CASP12	Q6UXS9	341 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ADAMTS15	Q8TE58	950 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	WDR60	Q8WVS4	1066 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	FAM120B	Q96EK7	910 aa	Known RBP	16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	L3HYPDH	Q96EM0	354 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	LAT2	Q9GZY6	243 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SLC7A10	Q9NS82	523 aa		16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZCCHC3	Q9NUD5	404 aa	Known RBP	16.75	■□□□□ 0.27

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms