RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 COL27A1Q8IZC6 1860 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 IGLV3-12A0A075B6K2 115 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LOC102723971A0A1B0GUV8 181 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LRIT2A6NDA9 550 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 H0YIV9 168 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 H3BMH7 237 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 BOLA2-SMG1P6H3BVE0 249 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SGK494L7N484 410 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FOXE1O00358 373 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PPP6CO00743 305 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 TAPBPO15533 448 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HCRTR1O43613 425 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SLC28A2O43868 658 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LCMT2O60294 686 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 B4GALT2O60909 372 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ALOX12BO75342 701 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RDH16O75452 317 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MYO1DO94832 1006 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CLIC3O95833 236 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HPP00738 406 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 STATHP02808 62 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HRGP04196 525 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 IFNA16P05015 189 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ALPLP05186 524 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 TFPTP0C1Z6 253 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NCK1P16333 377 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF182P17025 639 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GGT1P19440 569 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 F8A1P23610 371 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CRHBPP24387 322 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ELK4P28324 431 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 IL12AP29459 219 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 POLR2IP36954 125 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CASP2P42575 452 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SSR2P43308 183 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PSMD7P51665 324 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PLA2G16P53816 162 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 DIO3P55073 304 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HSD17B7P56937 341 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 OR4D2P58180 307 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RAB8AP61006 207 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 UFM1P61960 85 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CHRNB3Q05901 458 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF33BQ06732 778 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 KLRB1Q12918 225 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SRSF6Q13247 344 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ATP1A4Q13733 1029 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SERTAD2Q14140 314 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 EXT1Q16394 746 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 IMPG1Q17R60 797 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RGS21Q2M5E4 152 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SMU1Q2TAY7 513 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RFX4Q33E94 735 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FAM98BQ52LJ0 330 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 VWA2Q5GFL6 755 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PAGE3Q5JUK9 113 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 C6orf141Q5SZD1 244 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 KHDRBS2Q5VWX1 349 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FRG2Q64ET8 278 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HIST2H2BCQ6DN03 193 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FAAH2Q6GMR7 532 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 XAF1Q6GPH4 301 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GLYATQ6IB77 296 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 DLEU7Q6UYE1 221 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RNF165Q6ZSG1 346 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SHISA6Q6ZSJ9 500 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GPRIN3Q6ZVF9 776 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GOLGA7Q7Z5G4 137 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 VN1R4Q7Z5H5 301 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 IFNEQ86WN2 208 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ANKRD13BQ86YJ7 626 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PARP8Q8N3A8 854 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SLC5A8Q8N695 610 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HORMAD2Q8N7B1 307 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF555Q8NEP9 628 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 OR7G3Q8NG95 312 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 OR8J3Q8NGG0 315 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 DNAJB14Q8TBM8 379 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 S100ZQ8WXG8 99 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MUL1Q969V5 352 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 TMBIM1Q969X1 311 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ESAMQ96AP7 390 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 VPS33AQ96AX1 596 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SDCCAG3Q96C92 435 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 TM4SF19Q96DZ7 209 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 WDR34Q96EX3 536 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 VMP1Q96GC9 406 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 TEX37Q96LM6 180 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 C10orf90Q96M02 699 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RNF145Q96MT1 663 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MUS81Q96NY9 551 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FRG2BQ96QU4 278 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 KCNA7Q96RP8 456 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF347Q96SE7 839 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms