RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 ROPN1LQ96C74 230 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 DNAJA3Q96EY1 480 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 SSU72Q9NP77 194 aaKnown RBP17.73■□□□□ 0.43
TSC2-215ENST00000490108 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 ACER3Q9NUN7 267 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 SLC35A3Q9Y2D2 325 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.73■□□□□ 0.43
TSC2-215ENST00000490108 TLN2Q9Y4G6 2542 aa17.73■□□□□ 0.43
TSC2-215ENST00000490108 SULT2B1O00204 365 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 DNAJA2O60884 412 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 SCN2BO60939 215 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 TMCC2O75069 709 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 DHRS4L1P0CG22 281 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 LBPP18428 481 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 RYKP34925 604 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 PGM1P36871 562 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 CLNS1AP54105 237 aaKnown RBP17.72■□□□□ 0.43
TSC2-215ENST00000490108 FAM174BQ3ZCQ3 159 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 GPAT3Q53EU6 434 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 ADAM5Q6NVV9 412 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 FRRS1Q6ZNA5 592 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 ZNF100Q8IYN0 542 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 FAM71CQ8NEG0 241 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 KBTBD8Q8NFY9 601 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 LILRB1Q8NHL6 650 aaPredicted RBP17.72■□□□□ 0.43
TSC2-215ENST00000490108 TESCQ96BS2 214 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 PAIP2Q9BPZ3 127 aaKnown RBP17.72■□□□□ 0.43
TSC2-215ENST00000490108 SLC35A5Q9BS91 424 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 POLE3Q9NRF9 147 aa17.72■□□□□ 0.43
TSC2-215ENST00000490108 MARCOQ9UEW3 520 aaPredicted RBP17.72■□□□□ 0.43
TSC2-215ENST00000490108 SPIN1Q9Y657 262 aaPredicted RBP17.72■□□□□ 0.43
TSC2-215ENST00000490108 ZNF724A8MTY0 619 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 E9PBE3 544 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 ANKRD28O15084 1053 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 SNUPNO95149 360 aaKnown RBP17.71■□□□□ 0.43
TSC2-215ENST00000490108 S100A3P33764 101 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 CSNK2A1P68400 391 aaPredicted RBP17.71■□□□□ 0.43
TSC2-215ENST00000490108 BSPH1Q075Z2 132 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 CASP8Q14790 479 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 TMPPEQ6ZT21 453 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 GALNT5Q7Z7M9 940 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 SLC25A43Q8WUT9 341 aaPredicted RBP17.71■□□□□ 0.43
TSC2-215ENST00000490108 GTPBP3Q969Y2 492 aaKnown RBP17.71■□□□□ 0.43
TSC2-215ENST00000490108 NEURL3Q96EH8 262 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 CTPS2Q9NRF8 586 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 PNPOQ9NVS9 261 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 EMC3Q9P0I2 261 aa17.71■□□□□ 0.43
TSC2-215ENST00000490108 CSPG4Q6UVK1 2322 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 C1QCP02747 245 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 SOD3P08294 240 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 STX3Q13277 289 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 PPA1Q15181 289 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 DPY19L1Q2PZI1 675 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 ZNF672Q499Z4 452 aaPredicted RBP17.7■□□□□ 0.42
TSC2-215ENST00000490108 CEP85LQ5SZL2 805 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 ABLIM2Q6H8Q1 611 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 SEZ6L2Q6UXD5 910 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 LSRQ86X29 649 aaPredicted RBP17.7■□□□□ 0.42
TSC2-215ENST00000490108 RNF130Q86XS8 419 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 KIRREL3Q8IZU9 778 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 PIWIL2Q8TC59 973 aaKnown RBP17.7■□□□□ 0.42
TSC2-215ENST00000490108 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
TSC2-215ENST00000490108 ZHX1-C8orf76Q96EF9 292 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 USB1Q9BQ65 265 aaKnown RBP17.7■□□□□ 0.42
TSC2-215ENST00000490108 CCDC106Q9BWC9 280 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 MEAF6Q9HAF1 191 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 CHRNA9Q9UGM1 479 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 HAO1Q9UJM8 370 aa17.7■□□□□ 0.42
TSC2-215ENST00000490108 A0A1W2PP18 115 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 CLDN24A6NM45 220 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 IGHV3-9P01782 118 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 CCNA2P20248 432 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 IGHV1-2P23083 117 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 APOBEC1P41238 236 aaKnown RBP17.69■□□□□ 0.42
TSC2-215ENST00000490108 CHRNEQ04844 493 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 FAPQ12884 760 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 VEZF1Q14119 521 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 MPP2Q14168 576 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 GRINAQ7Z429 371 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 UBE2J2Q8N2K1 259 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 ARFGAP2Q8N6H7 521 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 ANKRD42Q8N9B4 389 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 SMAP2Q8WU79 429 aaPredicted RBP17.69■□□□□ 0.42
TSC2-215ENST00000490108 OIT3Q8WWZ8 545 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 ZG16BQ96DA0 208 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 MUCL1Q96DR8 90 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 CCDC115Q96NT0 180 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 SAP130Q9H0E3 1048 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.69■□□□□ 0.42
TSC2-215ENST00000490108 MAGED1Q9Y5V3 778 aaPredicted RBP17.69■□□□□ 0.42
TSC2-215ENST00000490108 ZANQ9Y493 2812 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 HIVEP2P31629 2446 aa17.69■□□□□ 0.42
TSC2-215ENST00000490108 PRAMEF27A3QJZ7 478 aa17.68■□□□□ 0.42
TSC2-215ENST00000490108 DPRXA6NFQ7 191 aa17.68■□□□□ 0.42
TSC2-215ENST00000490108 INAFM1C9JVW0 142 aa17.68■□□□□ 0.42
TSC2-215ENST00000490108 HMGN4O00479 90 aa17.68■□□□□ 0.42
TSC2-215ENST00000490108 GUSBP08236 651 aa17.68■□□□□ 0.42
TSC2-215ENST00000490108 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
TSC2-215ENST00000490108 GGT1P19440 569 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms