RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 SLC35G5Q96KT7 338 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF350Q9GZX5 532 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 BARX1Q9HBU1 254 aaPredicted RBP10.94□□□□□ -0.66
CPSF3-204ENST00000489403 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 SERINC1Q9NRX5 453 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 FAIMQ9NVQ4 179 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 MKLN1Q9UL63 735 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 B3GALT5Q9Y2C3 310 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ABCA1O95477 2261 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 A0A096LNT2 108 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 RNF103-CHMP3A0A140T963 221 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 DUXAA6NLW8 204 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SULT2B1O00204 365 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SSX4O60224 188 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 BCAS1O75363 584 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SPAG7O75391 227 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 RAD51DO75771 328 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 IGHV3-9P01782 118 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 PGCP20142 388 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 PGM1P36871 562 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SERPINB5P36952 375 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 CASP9P55211 416 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 CSNK2A1P68400 391 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 IRX1P78414 480 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SPOCK1Q08629 439 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 MAPK14Q16539 360 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 NRF1Q16656 503 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 OR4F3Q6IEY1 312 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SSX8Q7RTT4 187 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 C6orf120Q7Z4R8 191 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 P2RY8Q86VZ1 359 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 HIPK1Q86Z02 1210 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF100Q8IYN0 542 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 RIBC1Q8N443 379 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 TCP10LQ8TDR4 215 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SLC25A43Q8WUT9 341 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 TMEM234Q8WY98 164 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 DNAJA3Q96EY1 480 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 OR51I1Q9H343 314 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 ACER3Q9NUN7 267 aa10.93□□□□□ -0.66
CPSF3-204ENST00000489403 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF716A6NP11 495 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 E7EQL1 145 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 RNASET2O00584 256 aaKnown RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 KIAA0513O60268 411 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 GPRIN2O60269 458 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 NTF4P34130 210 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 NUDT6P53370 316 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 CLDN8P56748 225 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 PLAURQ03405 335 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 FUT5Q11128 374 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 MAD2L1Q13257 205 aaPredicted RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 PDK3Q15120 406 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 PGS1Q32NB8 556 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 AGAP6Q5VW22 663 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 PODNL1Q6PEZ8 512 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 TMEM108Q6UXF1 575 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 EIF3MQ7L2H7 374 aaKnown RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 C16orf62Q7Z3J2 963 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 MTDHQ86UE4 582 aaKnown RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 LSRQ86X29 649 aaPredicted RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 UBE2J2Q8N2K1 259 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 FAM71CQ8NEG0 241 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 OR52N5Q8NH56 324 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 MIPOL1Q8TD10 442 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 RADILQ96JH8 1075 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 ARL5BQ96KC2 179 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 RHNO1Q9BSD3 238 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 CCDC106Q9BWC9 280 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 CACNG6Q9BXT2 260 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 CTPS2Q9NRF8 586 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 ASIC5Q9NY37 505 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 EMC3Q9P0I2 261 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 CHRNA9Q9UGM1 479 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 NOSIPQ9Y314 301 aaKnown RBP10.92□□□□□ -0.66
CPSF3-204ENST00000489403 SLC25A15Q9Y619 301 aa10.92□□□□□ -0.66
CPSF3-204ENST00000489403 A0A1W2PR80 420 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 PMS2P2O95744 297 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 OR12D1P0DN82 309 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 TFPIP10646 304 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 CREB1P16220 341 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 TTKP33981 857 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 APOBEC1P41238 236 aaKnown RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF83P51522 516 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 EMX2Q04743 252 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 TYW3Q6IPR3 259 aaKnown RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 TNFAIP8L2Q6P589 184 aaPredicted RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 B3GLCTQ6Y288 498 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 PHC2Q8IXK0 858 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 OR10H5Q8NGA6 315 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 OR4A15Q8NGL6 344 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF563Q8TA94 476 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 HTRA1Q92743 480 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 APH1AQ96BI3 265 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms