RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TPRKBQ9Y3C4 175 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 MED31Q9Y3C7 131 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NPFFR2Q9Y5X5 522 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 WBP4O75554 376 aaKnown RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 PPM1BO75688 479 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 RANBP1P43487 201 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SLC6A8P48029 635 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 PRKCDQ05655 676 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 EXT1Q16394 746 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 TBR1Q16650 682 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NDUFAF6Q330K2 333 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 KIRREL2Q6UWL6 708 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 APOOLQ6UXV4 268 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 WDR88Q6ZMY6 472 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 P3H2Q8IVL5 708 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NLGN4XQ8N0W4 816 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 CLDN22Q8N7P3 220 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 BPIFB6Q8NFQ5 453 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NLGN4YQ8NFZ3 816 aaPredicted RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 TEX47Q8TBZ9 253 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 APH1BQ8WW43 257 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 LAT2Q9GZY6 243 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SLC25A19Q9HC21 320 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 CNIH4Q9P003 139 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 SMIM31A0A1B0GVY4 71 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 PIP5K1CO60331 668 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 EIF4E2O60573 245 aaKnown RBP11.62□□□□□ -0.55
NELFE-209ENST00000488426 MRPS14O60783 128 aaKnown RBP11.62□□□□□ -0.55
NELFE-209ENST00000488426 FAM87AP0C7U9 286 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 GABRB1P18505 474 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 FMO3P31513 532 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 GPR4P46093 362 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 ALDH3B2P48448 385 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 SMSP52788 366 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 CTBP2P56545 445 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 TMEM236Q5W0B7 351 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 WBP2NLQ6ICG8 309 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 CDK20Q8IZL9 346 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 CADM2Q8N3J6 435 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 ELP5Q8TE02 316 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 TRUB1Q8WWH5 349 aaKnown RBP11.62□□□□□ -0.55
NELFE-209ENST00000488426 UBE2FQ969M7 185 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 TBL1XR1Q9BZK7 514 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 CCNB1IP1Q9NPC3 277 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 PLCXD1Q9NUJ7 323 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 HS3ST3B1Q9Y662 390 aa11.62□□□□□ -0.55
NELFE-209ENST00000488426 TMEM200CA6NKL6 621 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 PYCARD-AS1I3L0S3 204 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 NDUFB5O43674 189 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 FADS1O60427 444 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 NADKO95544 446 aaPredicted RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 NTN1O95631 604 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 COX6A1P12074 109 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 EVI2BP34910 448 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 GIPRP48546 466 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 TMED10P49755 219 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 CDK5Q00535 292 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 PLAG1Q6DJT9 500 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 CASP12Q6UXS9 341 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 LINC00114Q6XXX2 140 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 ZNF620Q6ZNG0 422 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 TMPRSS11FQ6ZWK6 438 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SATL1Q86VE3 508 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 KIF18BQ86Y91 864 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 MISPQ8IVT2 679 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 GATSQ8NAP1 163 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 LSM14AQ8ND56 463 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 IPCEF1Q8WWN9 437 aaPredicted RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 OSTF1Q92882 214 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 IMMP1LQ96LU5 166 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 DUSP21Q9H596 190 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 VCX3AQ9NNX9 186 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 IL20Q9NYY1 176 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 MYOTQ9UBF9 498 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SH3D21A4FU49 640 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 HTR3EA5X5Y0 456 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 FAM20BO75063 409 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 IGFBP1P08833 259 aaPredicted RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 PRKAR1AP10644 381 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 IFI30P13284 250 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SLC35A2P78381 396 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 GINS1Q14691 196 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 BTBD16Q32M84 506 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 RPL13AP3Q6NVV1 102 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 PTCHD4Q6ZW05 846 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 MRGPREQ86SM8 312 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 CCDC103Q8IW40 242 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 ESX1Q8N693 406 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SLC15A4Q8N697 577 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms