RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 BCKDHAP12694 445 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SDC1P18827 310 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 S1PR1P21453 382 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ITGA3P26006 1051 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ELAVL4P26378 380 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 FEN1P39748 380 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 XKP51811 444 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SLC26A5P58743 744 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 C2orf80Q0P641 193 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 STX4Q12846 297 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 DCTN2Q13561 401 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SERTAD2Q14140 314 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 FAM71E1Q6IPT2 247 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 H3F3CQ6NXT2 135 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SLC48A1Q6P1K1 146 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 PAPD4Q6PIY7 484 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 KIF2BQ8N4N8 673 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 DPP10Q8N608 796 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 CLEC1AQ8NC01 280 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 APCDD1LQ8NCL9 501 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 OR4K14Q8NGD5 310 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 FAM76AQ8TAV0 307 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 RAB3IL1Q8TBN0 382 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 M1APQ8TC57 530 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ELP5Q8TE02 316 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 WIPF2Q8TF74 440 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 CKAP2Q8WWK9 683 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 IGFBPL1Q8WX77 278 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 EME1Q96AY2 570 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 KLHL29Q96CT2 875 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 TUBGCP3Q96CW5 907 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 C19orf60Q96EN9 201 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 CNRIP1Q96F85 164 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 WBP1Q96G27 269 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SENP5Q96HI0 755 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 METTL2AQ96IZ6 378 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 FCRL1Q96LA6 429 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ZNF681Q96N22 645 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 NR1H4Q96RI1 486 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 LPAR4Q99677 370 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 NPAS2Q99743 824 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 NUF2Q9BZD4 464 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 LHPPQ9H008 270 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 LIN28AQ9H9Z2 209 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 MMP25Q9NPA2 562 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ZNF71Q9NQZ8 489 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SNTG1Q9NSN8 517 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 INTS9Q9NV88 658 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 HSPB7Q9UBY9 170 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 MARCOQ9UEW3 520 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 C19orf25Q9UFG5 118 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 ZNF223Q9UK11 482 aaPredicted RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 PPIEQ9UNP9 301 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 MRPS33Q9Y291 106 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 SPACA6W5XKT8 324 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 APCP25054 2843 aa5.67□□□□□ -1.5
RTFDC1-209ENST00000487211 CSMD2Q7Z408 3487 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 TRBV5-7A0A0A0MS05 114 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 C1orf226A1L170 272 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 SAGE2PA6NJ88 616 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 GABRR3A8MPY1 467 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 A8MUI8 341 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 C17orf105B2RV13 164 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 FAM157AC9JC47 383 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 MKRN2OSH3BPM6 223 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 SDHDO14521 159 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ADAM10O14672 748 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 HDAC3O15379 428 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 SLC25A17O43808 307 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ERAL1O75616 437 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 CLPSP04118 112 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 CT62P0C5K7 136 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 SLC35E2P0CK97 266 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 G6PDP11413 515 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ICAM2P13598 275 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 PORP16435 677 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 TNNI3P19429 210 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 PIK3R1P27986 724 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 PTGER1P34995 402 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 RPL38P63173 70 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 EMX2Q04743 252 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 BIKQ13323 160 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 HEPACAMQ14CZ8 416 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 IL23RQ5VWK5 629 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 OR52E8Q6IFG1 317 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ANKRD26P1Q6NSI1 321 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 HMBOX1Q6NT76 420 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 MZT2BQ6NZ67 158 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 IGFL2Q6UWQ7 119 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 C16orf47Q6ZP98 133 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 TICAM1Q8IUC6 712 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ST13P4Q8IZP2 240 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 RBMXL3Q8N7X1 1067 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 C11orf65Q8NCR3 313 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 CATSPER1Q8NEC5 780 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 CLHC1Q8NHS4 586 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 ZNF721Q8TF20 911 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 NCLNQ969V3 563 aa5.66□□□□□ -1.5
RTFDC1-209ENST00000487211 RBM18Q96H35 190 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms