RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SLC19A3Q9BZV2 496 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CCDC90BQ9GZT6 254 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 DUSP21Q9H596 190 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 EGLN3Q9H6Z9 239 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 LIN28AQ9H9Z2 209 aaKnown RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MMP25Q9NPA2 562 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SDHAF3Q9NRP4 125 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MED17Q9NVC6 651 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TOR4AQ9NXH8 423 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF226Q9NYT6 803 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 IL20Q9NYY1 176 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TVP23BQ9NYZ1 205 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MYOTQ9UBF9 498 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TCFL5Q9UL49 500 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ICAM5Q9UMF0 924 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 FARSAQ9Y285 508 aaKnown RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 PCDHGB6Q9Y5F9 930 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 A0A1W2PQ72 361 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IRGMA1A4Y4 181 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 CLCA1A8K7I4 914 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 C21orf140B9A014 251 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 C9orf172C9J069 976 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 RNF223E7ERA6 249 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 KPNA4O00629 521 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 CDC40O60508 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 NOL3O60936 208 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 ADAM11O75078 769 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 NADKO95544 446 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IGF2P01344 180 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IGFBP1P08833 259 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 COX6A1P12074 109 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 MAKP20794 623 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TGM1P22735 817 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 CXCR1P25024 350 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 MSX1P28360 303 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 GRK5P34947 590 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SLC1A3P43003 542 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 PCYT1AP49585 367 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 LIMK1P53667 647 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SUMO3P55854 103 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SLC35A2P78381 396 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF117Q03924 483 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 CRYZQ08257 329 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TUBA3CQ13748 450 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 NEDD8Q15843 81 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SMN1Q16637 294 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 ZBED5Q49AG3 693 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SLC25A30Q5SVS4 291 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 FAM69BQ5VUD6 431 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 ACSM5Q6NUN0 579 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 OPN5Q6U736 354 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 APOOLQ6UXV4 268 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 WDR88Q6ZMY6 472 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 AHSA2Q719I0 299 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TIPARPQ7Z3E1 657 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 MRGPREQ86SM8 312 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 MEX3DQ86XN8 651 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 KIF18BQ86Y91 864 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 DND1Q8IYX4 353 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SPARTQ8N0X7 666 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 STX19Q8N4C7 294 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 FAM26EQ8N5C1 309 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IQCF1Q8N6M8 205 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TCEANCQ8N8B7 351 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 DEFB124Q8NES8 71 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 NLGN4YQ8NFZ3 816 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 OR2T33Q8NG76 320 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 OR11G2Q8NGC1 345 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 OR5W2Q8NH69 310 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 PFN4Q8NHR9 129 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 FANK1Q8TC84 345 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 BRIX1Q8TDN6 353 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM234Q8WY98 164 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 HGDQ93099 445 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 UBE2FQ969M7 185 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 C3orf49Q96BT1 292 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 KCTD12Q96CX2 325 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 DGCR14Q96DF8 476 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SH3YL1Q96HL8 342 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SAMD8Q96LT4 415 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IMMP1LQ96LU5 166 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 IL4I1Q96RQ9 567 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 COPS4Q9BT78 406 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM43Q9BTV4 400 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 GPR87Q9BY21 358 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 SPRY4Q9C004 299 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 NDEL1Q9GZM8 345 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 OR52D1Q9H346 318 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 DSN1Q9H410 356 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 MEPEQ9NQ76 525 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 CNOT2Q9NZN8 540 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 AASSQ9UDR5 926 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 PSORS1C1Q9UIG5 152 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 BAIAP2Q9UQB8 552 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 YARS2Q9Y2Z4 477 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 RPL36Q9Y3U8 105 aaKnown RBP6.44□□□□□ -1.38
SF3A3-206ENST00000487062 PCDHGB1Q9Y5G3 927 aa6.44□□□□□ -1.38
SF3A3-206ENST00000487062 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms