RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 IGKV1D-42A0A075B6H8 117 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 A0A087WUJ7 227 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 TRBV4-1A0A0J9YWV2 114 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 SHISA8B8ZZ34 492 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 FAM47E-STBD1D6RA91 191 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 CLOCKO15516 846 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 DEAF1O75398 565 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 CST1P01037 141 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 LDLRP01130 860 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 IGHG3P01860 377 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 H1F0P07305 194 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PNMTP11086 282 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 GP1BBP13224 206 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 HK1P19367 917 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 FASP25445 335 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 APOBEC1P41238 236 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 HMGA2P52926 109 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 GFRA1P56159 465 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PPIAP62937 165 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 FOXK1P85037 733 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 ST3GAL3Q11203 375 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 RIPK1Q13546 671 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 GK3PQ14409 553 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 TRAM2Q15035 370 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 RCN1Q15293 331 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 CMPK2Q5EBM0 449 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 ADGRG3Q86Y34 549 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 NKAIN4Q8IVV8 208 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PQLC1Q8N2U9 271 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 SLC7A13Q8TCU3 470 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 SLC38A4Q969I6 547 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 MPP4Q96JB8 637 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 UBL7Q96S82 380 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 EPYCQ99645 322 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PKP2Q99959 881 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PIGQQ9BRB3 760 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 FNDC11Q9BVV2 318 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 ACKR4Q9NPB9 350 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 PLSCR2Q9NRY7 297 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 LUZP4Q9P127 313 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 RPS6KB2Q9UBS0 482 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 LIPGQ9Y5X9 500 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 MAP1BP46821 2468 aaKnown RBP8.66□□□□□ -1.02
MCF2L-227ENST00000486806 BOD1L1Q8NFC6 3051 aa8.66□□□□□ -1.02
MCF2L-227ENST00000486806 TMED7-TICAM2A0A0A6YYA0 188 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TMEM72A0PK05 275 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 OR2M5A3KFT3 312 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 H0Y3Z8 333 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TFECO14948 347 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 EFNA2O43921 213 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 NPIPB7O75200 414 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 GADD45GO95257 159 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 ANPEPP15144 967 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 IL11P20809 199 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 IFNA8P32881 189 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 RBM34P42696 430 aaKnown RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 MAP2K6P52564 334 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 IST1P53990 364 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SMIM11AP58511 58 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 EGR4Q05215 589 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 MERTKQ12866 999 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 KLRB1Q12918 225 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SELENBP1Q13228 472 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 LY6DQ14210 128 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SEC23BQ15437 767 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 NHSL2Q5HYW2 709 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 RAET1LQ5VY80 246 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF324BQ6AW86 544 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 C3orf33Q6P1S2 294 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TRILQ7L0X0 811 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 AMIGO2Q86SJ2 522 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 YRDCQ86U90 279 aaKnown RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 EPHX4Q8IUS5 362 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 OR5M1Q8NGP8 315 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 OR14L1PQ8NHC6 308 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TMEM255BQ8WV15 326 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 CENPNQ96H22 339 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TMEM43Q9BTV4 400 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SLC6A15Q9H2J7 730 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 DCLRE1BQ9H816 532 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 REEP1Q9H902 201 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 RNPEPL1Q9HAU8 725 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 C6orf203Q9P0P8 240 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 STX18Q9P2W9 335 aaKnown RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 CHRNA9Q9UGM1 479 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 RPH3AQ9Y2J0 694 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TMED7Q9Y3B3 224 aa8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SAMHD1Q9Y3Z3 626 aaKnown RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 TPRP12270 2363 aaKnown RBP8.65□□□□□ -1.02
MCF2L-227ENST00000486806 SMG1Q96Q15 3661 aaKnown RBP8.65□□□□□ -1.03
MCF2L-227ENST00000486806 A0A087WUU8 490 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 A0A1B0GVC2 190 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SH3PXD2BA1X283 911 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ARRDC5A6NEK1 342 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TNFRSF11BO00300 401 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms