RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 H0YHG0 523 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 CHP2O43745 196 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 KRT36O76013 467 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 CST1P01037 141 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 H1F0P07305 194 aaKnown RBP15.9■□□□□ 0.14
CHMP3-207ENST00000485465 FUT4P22083 530 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 APOBEC1P41238 236 aaKnown RBP15.9■□□□□ 0.14
CHMP3-207ENST00000485465 ST3GAL3Q11203 375 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 CMPK2Q5EBM0 449 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 SWT1Q5T5J6 900 aaKnown RBP15.9■□□□□ 0.14
CHMP3-207ENST00000485465 RAET1LQ5VY80 246 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 OR2T5Q6IEZ7 315 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 FAM180AQ6UWF9 173 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 ADGRG3Q86Y34 549 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 CISD2Q8N5K1 135 aaKnown RBP15.9■□□□□ 0.14
CHMP3-207ENST00000485465 OR2T29Q8NH02 315 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 RNF217Q8TC41 542 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 SLC38A4Q969I6 547 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 DHRS1Q96LJ7 313 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 RRP15Q9Y3B9 282 aaKnown RBP15.9■□□□□ 0.14
CHMP3-207ENST00000485465 TESMINQ9Y4I5 508 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 HEATR5AQ86XA9 2040 aa15.9■□□□□ 0.14
CHMP3-207ENST00000485465 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 TMED7-TICAM2A0A0A6YYA0 188 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 OR2M5A3KFT3 312 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 CLOCKO15516 846 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 EFNA2O43921 213 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 PNMTP11086 282 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 FCGR1AP12314 374 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 CXCR1P25024 350 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 RRM2P31350 389 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 SMIM11AP58511 58 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 SPIBQ01892 262 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 FOXD4Q12950 439 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-207ENST00000485465 TRAM2Q15035 370 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 POMZP3Q6PJE2 187 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 SFXN2Q96NB2 322 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 PRSS27Q9BQR3 290 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 TSPAN10Q9H1Z9 355 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-207ENST00000485465 SLC6A15Q9H2J7 730 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 MAN2C1Q9NTJ4 1040 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 DNAJB9Q9UBS3 223 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 TMED7Q9Y3B3 224 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 LIPGQ9Y5X9 500 aa15.89■□□□□ 0.13
CHMP3-207ENST00000485465 A0A087WUJ7 227 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 A0A1W2PRQ8 180 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ELOA3DA6NLF2 546 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-207ENST00000485465 NPIPA5E9PKD4 350 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ADAMDEC1O15204 470 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ATXN7O15265 892 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-207ENST00000485465 GADD45GO95257 159 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 IGHG3P01860 377 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 IL11P20809 199 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 CHMP24386 653 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 FASP25445 335 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 GFRA1P56159 465 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 DGCR6Q14129 220 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ATP6AP1Q15904 470 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ELOA3BQ3SY89 546 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF324BQ6AW86 544 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-207ENST00000485465 LINC00114Q6XXX2 140 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 WDR88Q6ZMY6 472 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 NKAIN4Q8IVV8 208 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ELOA3Q8NG57 546 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 LRTOMTQ8WZ04 291 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 MPP4Q96JB8 637 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ANKRD19PQ9H560 264 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 LDAHQ9H6V9 325 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 SERINC1Q9NRX5 453 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 NPIPA1Q9UND3 350 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 SLC6A5Q9Y345 797 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF337Q9Y3M9 751 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 NCKAP5O14513 1909 aa15.88■□□□□ 0.13
CHMP3-207ENST00000485465 PIEZO2Q9H5I5 2752 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 TRGV5A0A0B4J1U4 118 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 TMEM72A0PK05 275 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 LINC01387J3KSC0 135 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 GNGT2O14610 69 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 SUSD5O60279 629 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 HCN1O60741 890 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 DEAF1O75398 565 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-207ENST00000485465 WISP2O76076 250 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 LDLRP01130 860 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 CCNA2P20248 432 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 ELK4P28324 431 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 MAP2K6P52564 334 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 HMGA2P52926 109 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 SELENBP1Q13228 472 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 TRILQ7L0X0 811 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 LSRQ86X29 649 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-207ENST00000485465 LSM14AQ8ND56 463 aaKnown RBP15.87■□□□□ 0.13
CHMP3-207ENST00000485465 OR52J3Q8NH60 311 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 NEIL3Q8TAT5 605 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 SNRNP40Q96DI7 357 aaKnown RBP15.87■□□□□ 0.13
CHMP3-207ENST00000485465 REEP1Q9H902 201 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 AGPAT4Q9NRZ5 378 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 LYVE1Q9Y5Y7 322 aa15.87■□□□□ 0.13
CHMP3-207ENST00000485465 A0A1B0GVC2 190 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms