RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SACM1LQ9NTJ5 587 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 MED17Q9NVC6 651 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SMPD3Q9NY59 655 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TAS2R10Q9NYW0 307 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 OSGIN1Q9UJX0 560 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 OR5H15A6NDH6 313 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TAF4O00268 1085 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 KLF4O43474 513 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TP53P04637 393 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 FUT1P19526 365 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TCEA1P23193 301 aaKnown RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 GPR4P46093 362 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 FOXO1Q12778 655 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 FOXF1Q12946 379 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 C1orf94Q6P1W5 598 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 KLHL17Q6TDP4 642 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 POC1BQ8TC44 478 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 DNAJC9Q8WXX5 260 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TMEM41AQ96HV5 264 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TOR3AQ9H497 397 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 CHD8Q9HCK8 2581 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 H0YJX3 145 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 P04436 131 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 IGFBP1P08833 259 aaPredicted RBP13.19□□□□□ -0.3
LRIF1-202ENST00000485275 RFPL3SP0C7P2 107 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 IL11P20809 199 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 DLX5P56178 289 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
LRIF1-202ENST00000485275 POMZP3Q6PJE2 187 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 IGFL2Q6UWQ7 119 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 Q6ZPB1 254 aaPredicted RBP13.19□□□□□ -0.3
LRIF1-202ENST00000485275 MED12Q93074 2177 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 C1GALT1C1Q96EU7 318 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 JSRP1Q96MG2 331 aaPredicted RBP13.19□□□□□ -0.3
LRIF1-202ENST00000485275 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 VCXQ9H320 206 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 C8orf4Q9NR00 106 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 SDHAF3Q9NRP4 125 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 ABI3Q9P2A4 366 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 REV1Q9UBZ9 1251 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 LRRC42Q9Y546 428 aa13.19□□□□□ -0.3
LRIF1-202ENST00000485275 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 ZC3H12DA2A288 527 aaKnown RBP13.18□□□□□ -0.3
LRIF1-202ENST00000485275 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 E9PQ18 207 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 EFNA2O43921 213 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 CLIC3O95833 236 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 ADAP00813 363 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 GNAO1P09471 354 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 ANXA8P13928 327 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 UQCRBP14927 111 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 MAKP20794 623 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 IFNA8P32881 189 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 CASRP41180 1078 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 TIGD3Q6B0B8 471 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 ADGRG3Q86Y34 549 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 OR5M1Q8NGP8 315 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 RELTQ969Z4 430 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 MPP4Q96JB8 637 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
LRIF1-202ENST00000485275 ADI1Q9BV57 179 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 DGCR6LQ9BY27 220 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 C15orf41Q9Y2V0 281 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 AP4B1Q9Y6B7 739 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 FREM3P0C091 2139 aa13.18□□□□□ -0.3
LRIF1-202ENST00000485275 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 K7ENP7 123 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 SNX4O95219 450 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 SOX14O95416 240 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 PDGFAP04085 211 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 GP1BBP13224 206 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 CCNA2P20248 432 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 MSX1P28360 303 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 RFC3P40938 356 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 RBM34P42696 430 aaKnown RBP13.17□□□□□ -0.3
LRIF1-202ENST00000485275 GSSP48637 474 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 MASP1P48740 699 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
LRIF1-202ENST00000485275 GRINAQ7Z429 371 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 KIF18BQ86Y91 864 aa13.17□□□□□ -0.3
LRIF1-202ENST00000485275 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms