RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ZNF367Q7RTV3 350 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 P2RY8Q86VZ1 359 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 OR51A7Q8NH64 312 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 ZNF563Q8TA94 476 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 SGTBQ96EQ0 304 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 IFT27Q9BW83 186 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 ICAM5Q9UMF0 924 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 WDFY3Q8IZQ1 3526 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 GPR179Q6PRD1 2367 aa15.29■□□□□ 0.04
CTSA-207ENST00000484855 TRIM64BA6NI03 449 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 TMX2-CTNND1H3BSU7 103 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 PPM1BO75688 479 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 GABARAPO95166 117 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 PNMTP11086 282 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 ENDOUP21128 410 aaKnown RBP15.28■□□□□ 0.04
CTSA-207ENST00000484855 GRK5P34947 590 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 TMEM44Q2T9K0 475 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 FAM69BQ5VUD6 431 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 ATG4DQ86TL0 474 aaPredicted RBP15.28■□□□□ 0.04
CTSA-207ENST00000484855 ENKD1Q9H0I2 346 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 LOXL2Q9Y4K0 774 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 SCO2O43819 266 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 GMFGO60234 142 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 EIF4E2O60573 245 aaKnown RBP15.28■□□□□ 0.04
CTSA-207ENST00000484855 PTP4A3O75365 173 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 SLC2A10O95528 541 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 EFR3AQ14156 821 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 LNX2Q8N448 690 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 GALNT6Q8NCL4 622 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 OR5L2Q8NGL0 311 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 OR8K3Q8NH51 312 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 BCL7BQ9BQE9 202 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 SLC19A3Q9BZV2 496 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 STRADBQ9C0K7 418 aa15.28■□□□□ 0.04
CTSA-207ENST00000484855 M0R082 166 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 WWP2O00308 870 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 RAB36O95755 333 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 ZNF806P0C7X5 589 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 CD36P16671 472 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 MST1P26927 711 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 TGFBR2P37173 567 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 CDH11P55287 796 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 NFATC3Q12968 1075 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 KLHL22Q53GT1 634 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 OR52I1Q8NGK6 324 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 RFKQ969G6 155 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 RNFT2Q96EX2 444 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 DEPDC7Q96QD5 511 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 TNFRSF13CQ96RJ3 184 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 EDEM2Q9BV94 578 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 MCCC2Q9HCC0 563 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 ERGIC3Q9Y282 383 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 PTRH2Q9Y3E5 179 aaKnown RBP15.27■□□□□ 0.04
CTSA-207ENST00000484855 B3GALT1Q9Y5Z6 326 aa15.27■□□□□ 0.04
CTSA-207ENST00000484855 PCNX3Q9H6A9 2034 aa15.27■□□□□ 0.03
CTSA-207ENST00000484855 IRGMA1A4Y4 181 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 C17orf51A8MQB3 221 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 FADS1O60427 444 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 ITPKBP27987 946 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 LIPAP38571 399 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 SLC1A3P43003 542 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 MED22Q15528 200 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 CTF1Q16619 201 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 DCAF12Q5T6F0 453 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 AADACL4Q5VUY2 407 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 OR5M3Q8NGP4 307 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 LGALS12Q96DT0 336 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 KLHDC3Q9BQ90 382 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 DIMT1Q9UNQ2 313 aaKnown RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 IGKV1D-42A0A075B6H8 117 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 TMEM200CA6NKL6 621 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 ZNF354AO60765 605 aaPredicted RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 ZFAND5O76080 213 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 NUDT14O95848 222 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 HSMCR30P0CW71 290 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 SLC6A6P31641 620 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 ETV5P41161 510 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 MTNR1AP48039 350 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 SLC9A3P48764 834 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 FBXW4P57775 412 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 RAB15P59190 212 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 RAB40BQ12829 278 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 AQP6Q13520 282 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 SLC35F1Q5T1Q4 408 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 NXNL2Q5VZ03 156 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 ZNF517Q6ZMY9 492 aaPredicted RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 RTL4Q6ZR62 310 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 CXXC5Q7LFL8 322 aaKnown RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 SLC43A2Q8N370 569 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 OR5M11Q96RB7 305 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 TMEM43Q9BTV4 400 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 HINT3Q9NQE9 182 aaKnown RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 MRPS18AQ9NVS2 196 aaKnown RBP15.26■□□□□ 0.03
CTSA-207ENST00000484855 BAIAP2Q9UQB8 552 aa15.26■□□□□ 0.03
CTSA-207ENST00000484855 LRRN3E7EW58 273 aa15.25■□□□□ 0.03
CTSA-207ENST00000484855 NADKO95544 446 aaPredicted RBP15.25■□□□□ 0.03
CTSA-207ENST00000484855 PPP1R3DO95685 299 aa15.25■□□□□ 0.03
CTSA-207ENST00000484855 UMODP07911 640 aa15.25■□□□□ 0.03
CTSA-207ENST00000484855 PGCP20142 388 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms