RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ENKD1Q9H0I2 346 aa12.83□□□□□ -0.36
CLK3-204ENST00000483723 DNAJC27Q9NZQ0 273 aa12.83□□□□□ -0.36
CLK3-204ENST00000483723 MYOTQ9UBF9 498 aa12.83□□□□□ -0.36
CLK3-204ENST00000483723 HS3ST3B1Q9Y662 390 aa12.83□□□□□ -0.36
CLK3-204ENST00000483723 CCDC187A0A096LP49 1063 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 TRIM64BA6NI03 449 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 KDM4EB2RXH2 506 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 WWP2O00308 870 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 KPNA4O00629 521 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 BHLHE40O14503 412 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 HCN1O60741 890 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 COX6A1P12074 109 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 FUT1P19526 365 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 SLC1A3P43003 542 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 TMBIM6P55061 237 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 CLEC12AQ5QGZ9 265 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 FAM69BQ5VUD6 431 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 RNLSQ5VYX0 342 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 PLAG1Q6DJT9 500 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 SLC30A6Q6NXT4 461 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 C6orf15Q6UXA7 325 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 LNX2Q8N448 690 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 M1APQ8TC57 530 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 FCGR1BQ92637 280 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 ISOC1Q96CN7 298 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 NMD3Q96D46 503 aaKnown RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 SGTBQ96EQ0 304 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 TEX12Q9BXU0 123 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 YIPF3Q9GZM5 350 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 COMMD3-BMI1R4GMX3 469 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 ENO4A6NNW6 628 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 C9orf172C9J069 976 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 BMP7P18075 431 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 GSTT1P30711 240 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 SLC9A3P48764 834 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 P2RX1P51575 399 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 GAS1P54826 345 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 CLDN6P56747 220 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 NHLH1Q02575 133 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 ZNF91Q05481 1191 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 EXT1Q16394 746 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 AADACL4Q5VUY2 407 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 SMARCD3Q6STE5 483 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 THSD4Q6ZMP0 1018 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 BCDIN3DQ7Z5W3 292 aaKnown RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 OR13C2Q8NGS9 318 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 C9orf43Q8TAL5 461 aaPredicted RBP12.82□□□□□ -0.36
CLK3-204ENST00000483723 FANK1Q8TC84 345 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 TMCO6Q96DC7 493 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 LRR1Q96L50 414 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 TNFRSF13CQ96RJ3 184 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 MMP25Q9NPA2 562 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 PTTG2Q9NZH5 202 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 PISDQ9UG56 409 aa12.82□□□□□ -0.36
CLK3-204ENST00000483723 PCNX3Q9H6A9 2034 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 ELOA3DA6NLF2 546 aaPredicted RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 SOCS6O14544 535 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 PLD2O14939 933 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 PRODHO43272 600 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 HCRTR2O43614 444 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 TRMUO75648 421 aaKnown RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 ADRA2AP08913 450 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 FBXO45P0C2W1 286 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 JMJD7P0C870 316 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 SAGP10523 405 aaPredicted RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 CDK4P11802 303 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 PGCP20142 388 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 FOLR3P41439 243 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 FBXW4P57775 412 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 RTL4Q6ZR62 310 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 SLC46A3Q7Z3Q1 461 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 CYP4Z2PQ8N1L4 340 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 OR52L1Q8NGH7 329 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 GPR119Q8TDV5 335 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 THAP3Q8WTV1 239 aaPredicted RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 YIPF6Q96EC8 236 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 CRELD1Q96HD1 420 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 DEPDC7Q96QD5 511 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 DEFB126Q9BYW3 111 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 FN3KQ9H479 309 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
CLK3-204ENST00000483723 RYDENQ9NUL5 291 aaKnown RBP12.81□□□□□ -0.36
CLK3-204ENST00000483723 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms