RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 DIO1P49895 249 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 KHKP50053 298 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 NME5P56597 212 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 HPCAP84074 193 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 GPAT3Q53EU6 434 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 SYT14P1Q58G82 188 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 SPANXN4Q5MJ08 99 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 ANXA8L1Q5VT79 327 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 HEPHL1Q6MZM0 1159 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 ADAM5Q6NVV9 412 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 Q6ZT83 130 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 KBTBD8Q8NFY9 601 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 LILRB1Q8NHL6 650 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 GTPBP3Q969Y2 492 aaKnown RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 ROPN1LQ96C74 230 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 C20orf27Q9GZN8 174 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 KCNK9Q9NPC2 374 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 ACER3Q9NUN7 267 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 A0A1W2PP18 115 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SCN2BO60939 215 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 BCAS1O75363 584 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 LBPP18428 481 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 CCNA2P20248 432 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 PGM1P36871 562 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 PHC1P78364 1004 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 PPP2R2BQ00005 443 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 FAPQ12884 760 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 VEZF1Q14119 521 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SAXO2Q658L1 398 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 TMPPEQ6ZT21 453 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 GALNT5Q7Z7M9 940 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 PIWIL2Q8TC59 973 aaKnown RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SMAP2Q8WU79 429 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SLC25A43Q8WUT9 341 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 TESCQ96BS2 214 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 ZHX1-C8orf76Q96EF9 292 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SORT1Q99523 831 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 USB1Q9BQ65 265 aaKnown RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 CTPS2Q9NRF8 586 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 MARCOQ9UEW3 520 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SLC35A3Q9Y2D2 325 aa13.5□□□□□ -0.25
LIMS3-203ENST00000480744 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 SPIN1Q9Y657 262 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-203ENST00000480744 CR1P17927 2039 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 JMJD1CQ15652 2540 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 INAFM1C9JVW0 142 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 TM9SF1O15321 606 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 DNAJA2O60884 412 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 IGHV3-9P01782 118 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 SOD3P08294 240 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 S100A3P33764 101 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 CDKN1AP38936 164 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 APOBEC1P41238 236 aaKnown RBP13.49□□□□□ -0.25
LIMS3-203ENST00000480744 FUT5Q11128 374 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 STX3Q13277 289 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 TNK1Q13470 666 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 PPA1Q15181 289 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 CLEC12BQ2HXU8 276 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
LIMS3-203ENST00000480744 FRRS1Q6ZNA5 592 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 UBE2J2Q8N2K1 259 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 NEURL3Q96EH8 262 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 TRMT61AQ96FX7 289 aaKnown RBP13.49□□□□□ -0.25
LIMS3-203ENST00000480744 TMBIM4Q9HC24 238 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 SSU72Q9NP77 194 aaKnown RBP13.49□□□□□ -0.25
LIMS3-203ENST00000480744 POLE3Q9NRF9 147 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 PNPOQ9NVS9 261 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 CHRNA9Q9UGM1 479 aa13.49□□□□□ -0.25
LIMS3-203ENST00000480744 HEATR1Q9H583 2144 aaKnown RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 CLDN24A6NM45 220 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 E9PBE3 544 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 ANKRD28O15084 1053 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 SNUPNO95149 360 aaKnown RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 DANCRP0C864 163 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 DHRS4L1P0CG22 281 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 GGT1P19440 569 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 IGHV1-2P23083 117 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 CHRNEQ04844 493 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 DPY19L1Q2PZI1 675 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 ABLIM2Q6H8Q1 611 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 GRINAQ7Z429 371 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 MTDHQ86UE4 582 aaKnown RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 RNF130Q86XS8 419 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 KIRREL3Q8IZU9 778 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms