RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 MED14OSP0DP75 135 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 PRKAR1AP10644 381 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 UBL4AP11441 157 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 PRG2P13727 222 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 RHCEP18577 417 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 FPR1P21462 350 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 HTR2AP28223 471 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 RRM2P31350 389 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 PTDSS1P48651 473 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 SSR4P51571 173 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 IST1P53990 364 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 GFRA1P56159 465 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 HOXC5Q00444 222 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 SPIBQ01892 262 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 NTRK2Q16620 822 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 NDUFAF6Q330K2 333 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ZNF791Q3KP31 576 aaPredicted RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 LPCAT4Q643R3 524 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 B3GNTL1Q67FW5 361 aaPredicted RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 NUP54Q7Z3B4 507 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 TMEM179BQ7Z7N9 219 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 CYP4Z1Q86W10 505 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 RPS19BP1Q86WX3 136 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 DND1Q8IYX4 353 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 OFCC1Q8IZS5 231 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 SIRT6Q8N6T7 355 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 GATSQ8NAP1 163 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ICA1LQ8NDH6 482 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 OR10G3Q8NGC4 313 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 OR4C15Q8NGM1 316 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 GRHL3Q8TE85 626 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 KCNE4Q8WWG9 221 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ASB15Q8WXK1 588 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 THAP4Q8WY91 577 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 FGF11Q92914 225 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 SLC35B4Q969S0 331 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 C1orf159Q96HA4 380 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 THOC3Q96J01 351 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 PRRC1Q96M27 445 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 FER1L6-AS2Q96M78 137 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 NODALQ96S42 347 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ZNF347Q96SE7 839 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 RTN4RQ9BZR6 473 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 CDCP1Q9H5V8 836 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ZBTB20Q9HC78 741 aaPredicted RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 EXOSC3Q9NQT5 275 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 MAN2C1Q9NTJ4 1040 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 TESQ9UGI8 421 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 OAZ3Q9UMX2 235 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 A4GNTQ9UNA3 340 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 YARS2Q9Y2Z4 477 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 TESMINQ9Y4I5 508 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 LYVE1Q9Y5Y7 322 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 MPDZO75970 2070 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ARGFXA6NJG6 315 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 C17orf51A8MQB3 221 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 H3BNH8 94 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 AP3D1O14617 1153 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 NKX2-8O15522 239 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 SCO2O43819 266 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 PEX1O43933 1283 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 E2F6O75461 281 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 OR5F1O95221 314 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 LYPD3O95274 346 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 UBTFL6P0CB48 400 aaPredicted RBP6.06□□□□□ -1.44
USP48-208ENST00000479177 GKN3PP0CG01 181 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 GLI4P10075 376 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 HPGDP15428 266 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ZNF23P17027 643 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ITGA3P26006 1051 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 HOXC12P31275 282 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 VHLP40337 213 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 PTGDSP41222 190 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ACAA2P42765 397 aaKnown RBP6.06□□□□□ -1.44
USP48-208ENST00000479177 YAP1P46937 504 aaKnown RBP6.06□□□□□ -1.44
USP48-208ENST00000479177 ID4P47928 161 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 LIMS1P48059 325 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 GAS1P54826 345 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 RRADP55042 308 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 CDH12P55289 794 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ZNF117Q03924 483 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 EPS8Q12929 822 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 GK3PQ14409 553 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 GANABQ14697 944 aaKnown RBP6.06□□□□□ -1.44
USP48-208ENST00000479177 ACER2Q5QJU3 275 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 TMEM81Q6P7N7 255 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 OPN5Q6U736 354 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 PLEKHM3Q6ZWE6 761 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 MARCH3Q86UD3 253 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 RANBP3LQ86VV4 465 aaPredicted RBP6.06□□□□□ -1.44
USP48-208ENST00000479177 MISPQ8IVT2 679 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 GPALPP1Q8IXQ4 340 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 ZNF440Q8IYI8 595 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 HS3ST5Q8IZT8 346 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 BEST3Q8N1M1 668 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 SVOPLQ8N434 492 aa6.06□□□□□ -1.44
USP48-208ENST00000479177 TMCO5AQ8N6Q1 288 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms